Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
RAPGEF3O95398 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RAPGEF3O95398 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
RAPGEF3O95398 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC27.57■■■□□ 2
RAPGEF3O95398 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
RAPGEF3O95398 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RAPGEF3O95398 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC27.56■■■□□ 2
RAPGEF3O95398 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC27.56■■■□□ 2
RAPGEF3O95398 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC27.56■■■□□ 2
RAPGEF3O95398 LAGE3P1-201ENST00000425356 484 ntBASIC27.56■■■□□ 2
RAPGEF3O95398 COX20P2-201ENST00000452636 358 ntBASIC27.56■■■□□ 2
RAPGEF3O95398 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC27.56■■■□□ 2
RAPGEF3O95398 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC27.56■■■□□ 2
RAPGEF3O95398 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC27.56■■■□□ 2
RAPGEF3O95398 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC27.56■■■□□ 2
RAPGEF3O95398 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC27.56■■■□□ 2
RAPGEF3O95398 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC27.56■■■□□ 2
RAPGEF3O95398 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC27.56■■■□□ 2
RAPGEF3O95398 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
RAPGEF3O95398 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
RAPGEF3O95398 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC27.55■■■□□ 2
RAPGEF3O95398 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RAPGEF3O95398 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC27.55■■■□□ 2
RAPGEF3O95398 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RAPGEF3O95398 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC27.55■■■□□ 2
RAPGEF3O95398 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC27.55■■■□□ 2
RAPGEF3O95398 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC27.55■■■□□ 2
RAPGEF3O95398 PWWP2AP1-201ENST00000429776 2273 ntBASIC27.55■■■□□ 2
RAPGEF3O95398 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC27.55■■■□□ 2
RAPGEF3O95398 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC27.55■■■□□ 2
RAPGEF3O95398 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC27.55■■■□□ 2
RAPGEF3O95398 AP002472.1-201ENST00000577490 586 ntBASIC27.55■■■□□ 2
RAPGEF3O95398 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC27.55■■■□□ 2
RAPGEF3O95398 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC27.55■■■□□ 2
RAPGEF3O95398 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC27.55■■■□□ 2
RAPGEF3O95398 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC27.55■■■□□ 2
RAPGEF3O95398 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC27.55■■■□□ 2
RAPGEF3O95398 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC27.55■■■□□ 2
RAPGEF3O95398 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC27.55■■■□□ 2
RAPGEF3O95398 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RAPGEF3O95398 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RAPGEF3O95398 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC27.55■■■□□ 2
RAPGEF3O95398 AC099343.3-201ENST00000605834 2503 ntBASIC27.55■■■□□ 2
RAPGEF3O95398 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC27.54■■■□□ 2
RAPGEF3O95398 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
RAPGEF3O95398 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC27.54■■■□□ 2
RAPGEF3O95398 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
RAPGEF3O95398 CNN2P11-201ENST00000429351 262 ntBASIC27.54■■■□□ 2
RAPGEF3O95398 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC27.54■■■□□ 2
RAPGEF3O95398 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
RAPGEF3O95398 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC27.54■■■□□ 2
RAPGEF3O95398 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC27.54■■■□□ 2
RAPGEF3O95398 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC27.54■■■□□ 2
RAPGEF3O95398 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC27.54■■■□□ 2
RAPGEF3O95398 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC27.54■■■□□ 2
RAPGEF3O95398 SPCS2P1-201ENST00000561636 679 ntBASIC27.54■■■□□ 2
RAPGEF3O95398 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
RAPGEF3O95398 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC27.54■■■□□ 2
RAPGEF3O95398 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC27.54■■■□□ 2
RAPGEF3O95398 AC092865.6-201ENST00000642101 219 ntBASIC27.54■■■□□ 2
RAPGEF3O95398 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
RAPGEF3O95398 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC27.53■■■□□ 2
RAPGEF3O95398 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
RAPGEF3O95398 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RAPGEF3O95398 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC27.53■■■□□ 2
RAPGEF3O95398 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RAPGEF3O95398 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC27.53■■■□□ 2
RAPGEF3O95398 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC27.53■■■□□ 2
RAPGEF3O95398 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC27.53■■■□□ 2
RAPGEF3O95398 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC27.53■■■□□ 2
RAPGEF3O95398 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC27.53■■■□□ 2
RAPGEF3O95398 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RAPGEF3O95398 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RAPGEF3O95398 SOD2-201ENST00000337404 991 ntTSL 2 BASIC27.53■■■□□ 2
RAPGEF3O95398 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
RAPGEF3O95398 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC27.53■■■□□ 2
RAPGEF3O95398 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC27.53■■■□□ 2
RAPGEF3O95398 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
RAPGEF3O95398 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC27.52■■■□□ 2
RAPGEF3O95398 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
RAPGEF3O95398 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC27.52■■■□□ 2
RAPGEF3O95398 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RAPGEF3O95398 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RAPGEF3O95398 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
RAPGEF3O95398 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC27.52■■■□□ 2
RAPGEF3O95398 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
RAPGEF3O95398 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RAPGEF3O95398 PNMT-202ENST00000394246 821 ntTSL 2 BASIC27.52■■■□□ 2
RAPGEF3O95398 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC27.52■■■□□ 2
RAPGEF3O95398 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC27.52■■■□□ 2
RAPGEF3O95398 KRT18P27-201ENST00000427733 1299 ntBASIC27.52■■■□□ 2
RAPGEF3O95398 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC27.52■■■□□ 2
RAPGEF3O95398 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC27.52■■■□□ 2
RAPGEF3O95398 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC27.52■■■□□ 2
RAPGEF3O95398 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
RAPGEF3O95398 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC27.52■■■□□ 2
RAPGEF3O95398 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC27.52■■■□□ 2
RAPGEF3O95398 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RAPGEF3O95398 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC27.52■■■□□ 2
RAPGEF3O95398 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC27.52■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms