Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLSTN1O94985 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CLSTN1O94985 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.43■□□□□ 0.86
CLSTN1O94985 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLSTN1O94985 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
CLSTN1O94985 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.43■□□□□ 0.86
CLSTN1O94985 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.43■□□□□ 0.86
CLSTN1O94985 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLSTN1O94985 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLSTN1O94985 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.42■□□□□ 0.86
CLSTN1O94985 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 NAPSB-206ENST00000562112 1266 ntBASIC20.42■□□□□ 0.86
CLSTN1O94985 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CLSTN1O94985 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.42■□□□□ 0.86
CLSTN1O94985 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.42■□□□□ 0.86
CLSTN1O94985 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CLSTN1O94985 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.42■□□□□ 0.86
CLSTN1O94985 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.42■□□□□ 0.86
CLSTN1O94985 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.42■□□□□ 0.86
CLSTN1O94985 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLSTN1O94985 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.41■□□□□ 0.86
CLSTN1O94985 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CLSTN1O94985 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.41■□□□□ 0.86
CLSTN1O94985 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CLSTN1O94985 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.41■□□□□ 0.86
CLSTN1O94985 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CLSTN1O94985 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.41■□□□□ 0.86
CLSTN1O94985 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CLSTN1O94985 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CLSTN1O94985 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
CLSTN1O94985 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.41■□□□□ 0.86
CLSTN1O94985 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.41■□□□□ 0.86
CLSTN1O94985 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.41■□□□□ 0.86
CLSTN1O94985 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.41■□□□□ 0.86
CLSTN1O94985 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 AC096733.2-201ENST00000609937 1394 ntBASIC20.41■□□□□ 0.86
CLSTN1O94985 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.41■□□□□ 0.86
CLSTN1O94985 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CLSTN1O94985 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.41■□□□□ 0.86
CLSTN1O94985 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLSTN1O94985 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLSTN1O94985 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLSTN1O94985 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLSTN1O94985 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLSTN1O94985 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLSTN1O94985 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLSTN1O94985 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLSTN1O94985 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLSTN1O94985 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLSTN1O94985 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.4■□□□□ 0.86
CLSTN1O94985 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CLSTN1O94985 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CLSTN1O94985 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLSTN1O94985 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CLSTN1O94985 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLSTN1O94985 FITM1-202ENST00000559294 800 ntBASIC20.4■□□□□ 0.86
CLSTN1O94985 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CLSTN1O94985 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLSTN1O94985 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLSTN1O94985 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.4■□□□□ 0.86
CLSTN1O94985 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CLSTN1O94985 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLSTN1O94985 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLSTN1O94985 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.39■□□□□ 0.86
CLSTN1O94985 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLSTN1O94985 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLSTN1O94985 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLSTN1O94985 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLSTN1O94985 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms