Protein–RNA interactions for Protein: O94911

ABCA8, ATP-binding cassette sub-family A member 8, humanhuman

Predictions only

Length 1,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8O94911 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA8O94911 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
ABCA8O94911 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA8O94911 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC28.61■■■□□ 2.17
ABCA8O94911 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA8O94911 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA8O94911 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA8O94911 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC28.61■■■□□ 2.17
ABCA8O94911 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC28.61■■■□□ 2.17
ABCA8O94911 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC28.61■■■□□ 2.17
ABCA8O94911 UNC93B6-202ENST00000528242 690 ntBASIC28.61■■■□□ 2.17
ABCA8O94911 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC28.61■■■□□ 2.17
ABCA8O94911 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA8O94911 COX5A-204ENST00000567270 579 ntTSL 3 BASIC28.61■■■□□ 2.17
ABCA8O94911 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC28.61■■■□□ 2.17
ABCA8O94911 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA8O94911 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
ABCA8O94911 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ABCA8O94911 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA8O94911 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA8O94911 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
ABCA8O94911 FUOM-202ENST00000368551 628 ntTSL 3 BASIC28.6■■■□□ 2.17
ABCA8O94911 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA8O94911 HNRNPA1P28-201ENST00000424481 961 ntBASIC28.6■■■□□ 2.17
ABCA8O94911 AC007967.2-201ENST00000432613 625 ntBASIC28.6■■■□□ 2.17
ABCA8O94911 DNAJB3-201ENST00000446806 729 ntBASIC28.6■■■□□ 2.17
ABCA8O94911 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC28.6■■■□□ 2.17
ABCA8O94911 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC28.6■■■□□ 2.17
ABCA8O94911 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC28.6■■■□□ 2.17
ABCA8O94911 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC28.6■■■□□ 2.17
ABCA8O94911 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA8O94911 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ABCA8O94911 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA8O94911 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA8O94911 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA8O94911 KRT18P27-201ENST00000427733 1299 ntBASIC28.59■■■□□ 2.17
ABCA8O94911 AP006288.1-201ENST00000446065 395 ntBASIC28.59■■■□□ 2.17
ABCA8O94911 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC28.59■■■□□ 2.17
ABCA8O94911 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC28.59■■■□□ 2.17
ABCA8O94911 RNF151-202ENST00000569210 853 ntTSL 2 BASIC28.59■■■□□ 2.17
ABCA8O94911 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA8O94911 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA8O94911 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
ABCA8O94911 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
ABCA8O94911 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC28.59■■■□□ 2.17
ABCA8O94911 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA8O94911 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
ABCA8O94911 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
ABCA8O94911 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ABCA8O94911 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA8O94911 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA8O94911 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA8O94911 PMP22-202ENST00000395936 816 ntTSL 3 BASIC28.58■■■□□ 2.17
ABCA8O94911 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA8O94911 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC28.58■■■□□ 2.17
ABCA8O94911 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC28.58■■■□□ 2.17
ABCA8O94911 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC28.58■■■□□ 2.17
ABCA8O94911 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC28.58■■■□□ 2.17
ABCA8O94911 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC28.58■■■□□ 2.17
ABCA8O94911 MTDHP4-201ENST00000600287 670 ntBASIC28.58■■■□□ 2.17
ABCA8O94911 AC134684.3-201ENST00000641758 218 ntBASIC28.58■■■□□ 2.17
ABCA8O94911 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA8O94911 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA8O94911 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
ABCA8O94911 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA8O94911 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC28.58■■■□□ 2.17
ABCA8O94911 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA8O94911 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA8O94911 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA8O94911 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC28.58■■■□□ 2.17
ABCA8O94911 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA8O94911 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA8O94911 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ABCA8O94911 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC28.58■■■□□ 2.16
ABCA8O94911 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA8O94911 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA8O94911 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA8O94911 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA8O94911 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA8O94911 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA8O94911 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
ABCA8O94911 LAGE3P1-201ENST00000425356 484 ntBASIC28.57■■■□□ 2.16
ABCA8O94911 AC009947.1-201ENST00000444350 727 ntBASIC28.57■■■□□ 2.16
ABCA8O94911 DNAJB3-202ENST00000449667 1266 ntBASIC28.57■■■□□ 2.16
ABCA8O94911 AC112482.1-201ENST00000492080 688 ntBASIC28.57■■■□□ 2.16
ABCA8O94911 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC28.57■■■□□ 2.16
ABCA8O94911 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA8O94911 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA8O94911 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA8O94911 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
ABCA8O94911 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCA8O94911 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
ABCA8O94911 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCA8O94911 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
ABCA8O94911 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC28.56■■■□□ 2.16
ABCA8O94911 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
ABCA8O94911 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC28.56■■■□□ 2.16
ABCA8O94911 CRCP-205ENST00000431089 942 ntTSL 2 BASIC28.56■■■□□ 2.16
ABCA8O94911 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCA8O94911 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC28.56■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms