Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM3O75382 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRIM3O75382 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM3O75382 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.21■□□□□ 0.34
TRIM3O75382 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM3O75382 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM3O75382 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRIM3O75382 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM3O75382 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM3O75382 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM3O75382 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRIM3O75382 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM3O75382 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM3O75382 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM3O75382 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM3O75382 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRIM3O75382 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRIM3O75382 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM3O75382 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRIM3O75382 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM3O75382 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM3O75382 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM3O75382 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM3O75382 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM3O75382 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TRIM3O75382 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM3O75382 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM3O75382 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM3O75382 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TRIM3O75382 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM3O75382 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM3O75382 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM3O75382 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM3O75382 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM3O75382 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRIM3O75382 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM3O75382 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM3O75382 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM3O75382 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM3O75382 GPAT2P1-201ENST00000444924 1672 ntBASIC17.19■□□□□ 0.34
TRIM3O75382 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
TRIM3O75382 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM3O75382 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM3O75382 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM3O75382 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM3O75382 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM3O75382 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRIM3O75382 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRIM3O75382 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM3O75382 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRIM3O75382 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM3O75382 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM3O75382 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRIM3O75382 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRIM3O75382 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM3O75382 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM3O75382 NOC2LP2-201ENST00000407594 1944 ntBASIC17.18■□□□□ 0.34
TRIM3O75382 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM3O75382 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM3O75382 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM3O75382 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM3O75382 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM3O75382 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM3O75382 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM3O75382 AL023284.2-201ENST00000405850 579 ntBASIC17.18■□□□□ 0.34
TRIM3O75382 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM3O75382 AC117947.1-201ENST00000427448 529 ntBASIC17.18■□□□□ 0.34
TRIM3O75382 DUX4L26-201ENST00000489078 1255 ntBASIC17.18■□□□□ 0.34
TRIM3O75382 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.18■□□□□ 0.34
TRIM3O75382 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
TRIM3O75382 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM3O75382 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM3O75382 AL049597.2-201ENST00000565575 961 ntBASIC17.18■□□□□ 0.34
TRIM3O75382 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRIM3O75382 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM3O75382 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM3O75382 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM3O75382 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
TRIM3O75382 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM3O75382 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM3O75382 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRIM3O75382 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms