Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD1O75127 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.64■■□□□ 1.37
PTCD1O75127 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
PTCD1O75127 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC23.64■■□□□ 1.37
PTCD1O75127 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.64■■□□□ 1.37
PTCD1O75127 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD1O75127 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD1O75127 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.37
PTCD1O75127 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.64■■□□□ 1.37
PTCD1O75127 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.64■■□□□ 1.37
PTCD1O75127 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
PTCD1O75127 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD1O75127 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD1O75127 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD1O75127 AL049812.1-201ENST00000432563 2267 ntBASIC23.63■■□□□ 1.37
PTCD1O75127 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD1O75127 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD1O75127 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD1O75127 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD1O75127 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC23.63■■□□□ 1.37
PTCD1O75127 AC096582.2-201ENST00000510860 516 ntBASIC23.63■■□□□ 1.37
PTCD1O75127 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
PTCD1O75127 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
PTCD1O75127 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
PTCD1O75127 AP001005.1-201ENST00000571755 1248 ntBASIC23.63■■□□□ 1.37
PTCD1O75127 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PTCD1O75127 AC148477.8-201ENST00000624298 468 ntBASIC23.63■■□□□ 1.37
PTCD1O75127 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC23.63■■□□□ 1.37
PTCD1O75127 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.63■■□□□ 1.37
PTCD1O75127 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD1O75127 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD1O75127 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD1O75127 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.62■■□□□ 1.37
PTCD1O75127 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD1O75127 IL9RP2-201ENST00000423948 1312 ntBASIC23.62■■□□□ 1.37
PTCD1O75127 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD1O75127 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.62■■□□□ 1.37
PTCD1O75127 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
PTCD1O75127 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD1O75127 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD1O75127 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD1O75127 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD1O75127 KRT18P41-201ENST00000518924 1277 ntBASIC23.62■■□□□ 1.37
PTCD1O75127 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC23.62■■□□□ 1.37
PTCD1O75127 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PTCD1O75127 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD1O75127 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.62■■□□□ 1.37
PTCD1O75127 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD1O75127 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD1O75127 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD1O75127 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTCD1O75127 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTCD1O75127 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTCD1O75127 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTCD1O75127 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTCD1O75127 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
PTCD1O75127 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PTCD1O75127 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PTCD1O75127 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC23.61■■□□□ 1.37
PTCD1O75127 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23.61■■□□□ 1.37
PTCD1O75127 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
PTCD1O75127 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.61■■□□□ 1.37
PTCD1O75127 AL773604.1-201ENST00000617417 272 ntBASIC23.61■■□□□ 1.37
PTCD1O75127 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTCD1O75127 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PTCD1O75127 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PTCD1O75127 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PTCD1O75127 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.61■■□□□ 1.37
PTCD1O75127 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PTCD1O75127 UROS-202ENST00000368778 1556 ntTSL 2 BASIC23.61■■□□□ 1.37
PTCD1O75127 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PTCD1O75127 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.61■■□□□ 1.37
PTCD1O75127 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCD1O75127 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCD1O75127 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
PTCD1O75127 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
PTCD1O75127 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCD1O75127 AP000593.1-201ENST00000393668 712 ntBASIC23.6■■□□□ 1.37
PTCD1O75127 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.6■■□□□ 1.37
PTCD1O75127 AC132008.2-207ENST00000454517 770 ntBASIC23.6■■□□□ 1.37
PTCD1O75127 SLC25A1P1-201ENST00000528351 927 ntBASIC23.6■■□□□ 1.37
PTCD1O75127 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC23.6■■□□□ 1.37
PTCD1O75127 AC064862.7-201ENST00000604520 867 ntBASIC23.6■■□□□ 1.37
PTCD1O75127 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.6■■□□□ 1.37
PTCD1O75127 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.6■■□□□ 1.37
PTCD1O75127 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PTCD1O75127 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PTCD1O75127 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCD1O75127 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC23.6■■□□□ 1.37
PTCD1O75127 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCD1O75127 AL161938.1-201ENST00000569833 2180 ntBASIC23.59■■□□□ 1.37
PTCD1O75127 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PTCD1O75127 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PTCD1O75127 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCD1O75127 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCD1O75127 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCD1O75127 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.59■■□□□ 1.37
PTCD1O75127 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCD1O75127 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCD1O75127 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms