Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.64□□□□□ -0.39
NDUFA1O15239 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
NDUFA1O15239 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
NDUFA1O15239 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
NDUFA1O15239 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.64□□□□□ -0.39
NDUFA1O15239 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.64□□□□□ -0.39
NDUFA1O15239 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC12.64□□□□□ -0.39
NDUFA1O15239 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.64□□□□□ -0.39
NDUFA1O15239 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 TSPY21P-201ENST00000433481 731 ntBASIC12.64□□□□□ -0.39
NDUFA1O15239 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 SLC29A4P2-201ENST00000504749 1089 ntBASIC12.64□□□□□ -0.39
NDUFA1O15239 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.64□□□□□ -0.39
NDUFA1O15239 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
NDUFA1O15239 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.64□□□□□ -0.39
NDUFA1O15239 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.64□□□□□ -0.39
NDUFA1O15239 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.64□□□□□ -0.39
NDUFA1O15239 HEIH-201ENST00000623091 1652 ntBASIC12.64□□□□□ -0.39
NDUFA1O15239 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.64□□□□□ -0.39
NDUFA1O15239 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NDUFA1O15239 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
NDUFA1O15239 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
NDUFA1O15239 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.63□□□□□ -0.39
NDUFA1O15239 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.63□□□□□ -0.39
NDUFA1O15239 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 AC141586.5-201ENST00000624546 2050 ntBASIC12.63□□□□□ -0.39
NDUFA1O15239 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
NDUFA1O15239 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
NDUFA1O15239 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
NDUFA1O15239 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
NDUFA1O15239 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.63□□□□□ -0.39
NDUFA1O15239 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC12.63□□□□□ -0.39
NDUFA1O15239 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC12.63□□□□□ -0.39
NDUFA1O15239 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC12.63□□□□□ -0.39
NDUFA1O15239 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC12.63□□□□□ -0.39
NDUFA1O15239 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.63□□□□□ -0.39
NDUFA1O15239 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.63□□□□□ -0.39
NDUFA1O15239 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
NDUFA1O15239 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
NDUFA1O15239 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.63□□□□□ -0.39
NDUFA1O15239 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
NDUFA1O15239 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
NDUFA1O15239 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFA1O15239 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
NDUFA1O15239 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFA1O15239 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFA1O15239 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFA1O15239 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
NDUFA1O15239 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFA1O15239 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 AC093677.2-201ENST00000600169 1863 ntBASIC12.62□□□□□ -0.39
NDUFA1O15239 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
NDUFA1O15239 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFA1O15239 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
NDUFA1O15239 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms