Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDH17O14917 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PCDH17O14917 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PCDH17O14917 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH17O14917 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDH17O14917 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH17O14917 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.62■□□□□ 0.41
PCDH17O14917 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH17O14917 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 FEM1AP3-201ENST00000403722 1741 ntBASIC17.62■□□□□ 0.41
PCDH17O14917 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH17O14917 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH17O14917 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDH17O14917 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH17O14917 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH17O14917 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH17O14917 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDH17O14917 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH17O14917 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDH17O14917 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH17O14917 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH17O14917 MIR3180-5-201ENST00000583743 153 ntBASIC17.62■□□□□ 0.41
PCDH17O14917 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDH17O14917 AC011558.1-201ENST00000623459 338 ntBASIC17.62■□□□□ 0.41
PCDH17O14917 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PCDH17O14917 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH17O14917 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDH17O14917 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH17O14917 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH17O14917 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDH17O14917 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDH17O14917 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH17O14917 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
PCDH17O14917 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDH17O14917 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDH17O14917 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 AC009947.2-201ENST00000444014 672 ntBASIC17.61■□□□□ 0.41
PCDH17O14917 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH17O14917 CR769767.2-201ENST00000622735 460 ntBASIC17.61■□□□□ 0.41
PCDH17O14917 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 KRT8P7-201ENST00000533003 1432 ntBASIC17.61■□□□□ 0.41
PCDH17O14917 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH17O14917 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH17O14917 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDH17O14917 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH17O14917 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDH17O14917 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH17O14917 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDH17O14917 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDH17O14917 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 AL023284.2-201ENST00000405850 579 ntBASIC17.6■□□□□ 0.41
PCDH17O14917 AC034232.1-201ENST00000506026 1064 ntBASIC17.6■□□□□ 0.41
PCDH17O14917 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH17O14917 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH17O14917 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDH17O14917 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH17O14917 MIR4674-201ENST00000582457 87 ntBASIC17.6■□□□□ 0.41
PCDH17O14917 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PCDH17O14917 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCDH17O14917 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 MYC-208ENST00000641036 567 ntBASIC17.6■□□□□ 0.41
PCDH17O14917 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH17O14917 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PCDH17O14917 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms