Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN5O00501 AC009065.1-201ENST00000564055 1225 ntBASIC19.44■□□□□ 0.7
CLDN5O00501 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN5O00501 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.44■□□□□ 0.7
CLDN5O00501 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN5O00501 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.44■□□□□ 0.7
CLDN5O00501 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.44■□□□□ 0.7
CLDN5O00501 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN5O00501 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN5O00501 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN5O00501 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN5O00501 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN5O00501 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN5O00501 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
CLDN5O00501 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN5O00501 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN5O00501 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN5O00501 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN5O00501 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN5O00501 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.43■□□□□ 0.7
CLDN5O00501 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.43■□□□□ 0.7
CLDN5O00501 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN5O00501 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN5O00501 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN5O00501 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN5O00501 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN5O00501 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN5O00501 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.43■□□□□ 0.7
CLDN5O00501 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN5O00501 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN5O00501 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 WIZP1-201ENST00000531444 2299 ntBASIC19.42■□□□□ 0.7
CLDN5O00501 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN5O00501 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLDN5O00501 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN5O00501 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN5O00501 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN5O00501 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN5O00501 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.42■□□□□ 0.7
CLDN5O00501 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN5O00501 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.42■□□□□ 0.7
CLDN5O00501 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.42■□□□□ 0.7
CLDN5O00501 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.42■□□□□ 0.7
CLDN5O00501 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.42■□□□□ 0.7
CLDN5O00501 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN5O00501 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.42■□□□□ 0.7
CLDN5O00501 AC093458.2-201ENST00000623150 629 ntBASIC19.42■□□□□ 0.7
CLDN5O00501 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.42■□□□□ 0.7
CLDN5O00501 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN5O00501 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLDN5O00501 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN5O00501 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN5O00501 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN5O00501 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN5O00501 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN5O00501 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN5O00501 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN5O00501 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN5O00501 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLDN5O00501 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN5O00501 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN5O00501 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CLDN5O00501 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN5O00501 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN5O00501 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.41■□□□□ 0.7
CLDN5O00501 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CLDN5O00501 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.41■□□□□ 0.7
CLDN5O00501 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN5O00501 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN5O00501 AC011498.5-201ENST00000592027 486 ntBASIC19.41■□□□□ 0.7
CLDN5O00501 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN5O00501 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN5O00501 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN5O00501 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN5O00501 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN5O00501 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLDN5O00501 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN5O00501 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN5O00501 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN5O00501 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN5O00501 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN5O00501 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN5O00501 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms