Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC28A1O00337 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC28A1O00337 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC28A1O00337 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC28A1O00337 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC28A1O00337 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC28A1O00337 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC28A1O00337 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC28A1O00337 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC28A1O00337 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC28A1O00337 AC138028.4-201ENST00000564984 1845 ntBASIC17.78■□□□□ 0.44
SLC28A1O00337 ABHD17AP1-201ENST00000358206 933 ntBASIC17.78■□□□□ 0.44
SLC28A1O00337 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC28A1O00337 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC28A1O00337 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC28A1O00337 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC28A1O00337 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC28A1O00337 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC28A1O00337 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC28A1O00337 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC28A1O00337 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC28A1O00337 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC28A1O00337 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC28A1O00337 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC28A1O00337 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC28A1O00337 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC28A1O00337 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC28A1O00337 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC28A1O00337 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SLC28A1O00337 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC28A1O00337 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC28A1O00337 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC28A1O00337 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC28A1O00337 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC28A1O00337 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC28A1O00337 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC28A1O00337 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC28A1O00337 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC28A1O00337 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC28A1O00337 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SLC28A1O00337 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC28A1O00337 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC28A1O00337 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC28A1O00337 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SLC28A1O00337 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC28A1O00337 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC28A1O00337 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC28A1O00337 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC28A1O00337 MIR3180-5-201ENST00000583743 153 ntBASIC17.77■□□□□ 0.44
SLC28A1O00337 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC28A1O00337 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.77■□□□□ 0.44
SLC28A1O00337 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC28A1O00337 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SLC28A1O00337 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SLC28A1O00337 KRT8P50-201ENST00000562022 1438 ntBASIC17.77■□□□□ 0.44
SLC28A1O00337 GMCL1P1-201ENST00000463439 1581 ntBASIC17.77■□□□□ 0.44
SLC28A1O00337 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC28A1O00337 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.77■□□□□ 0.43
SLC28A1O00337 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.77■□□□□ 0.43
SLC28A1O00337 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC28A1O00337 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC28A1O00337 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.77■□□□□ 0.43
SLC28A1O00337 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC28A1O00337 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SLC28A1O00337 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC28A1O00337 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SLC28A1O00337 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC28A1O00337 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC28A1O00337 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC28A1O00337 PCDHB18P-201ENST00000524813 2368 ntBASIC17.76■□□□□ 0.43
SLC28A1O00337 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC28A1O00337 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC28A1O00337 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC28A1O00337 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC28A1O00337 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC28A1O00337 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC28A1O00337 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC28A1O00337 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC28A1O00337 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SLC28A1O00337 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC28A1O00337 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SLC28A1O00337 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC28A1O00337 PRORSD1P-201ENST00000295112 541 ntBASIC17.76■□□□□ 0.43
SLC28A1O00337 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC28A1O00337 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.76■□□□□ 0.43
SLC28A1O00337 CRYGFP-201ENST00000418459 633 ntBASIC17.76■□□□□ 0.43
SLC28A1O00337 AC012618.2-201ENST00000428058 849 ntBASIC17.76■□□□□ 0.43
SLC28A1O00337 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC28A1O00337 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC28A1O00337 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC28A1O00337 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC28A1O00337 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC28A1O00337 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SLC28A1O00337 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC28A1O00337 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC28A1O00337 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC28A1O00337 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SLC28A1O00337 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC28A1O00337 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC28A1O00337 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms