Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 AC093458.2-201ENST00000623150 629 ntBASIC18.85■□□□□ 0.61
CBX4O00257 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.85■□□□□ 0.61
CBX4O00257 AP000550.4-202ENST00000639755 178 ntBASIC18.85■□□□□ 0.61
CBX4O00257 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CBX4O00257 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CBX4O00257 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX4O00257 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX4O00257 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX4O00257 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX4O00257 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX4O00257 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX4O00257 AL163051.1-201ENST00000569214 1512 ntBASIC18.84■□□□□ 0.61
CBX4O00257 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX4O00257 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX4O00257 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CBX4O00257 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX4O00257 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX4O00257 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CBX4O00257 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX4O00257 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.84■□□□□ 0.61
CBX4O00257 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX4O00257 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.84■□□□□ 0.61
CBX4O00257 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.84■□□□□ 0.61
CBX4O00257 AC009065.1-201ENST00000564055 1225 ntBASIC18.84■□□□□ 0.61
CBX4O00257 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.84■□□□□ 0.61
CBX4O00257 AC079602.3-201ENST00000623931 403 ntBASIC18.84■□□□□ 0.61
CBX4O00257 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CBX4O00257 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CBX4O00257 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CBX4O00257 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.84■□□□□ 0.61
CBX4O00257 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX4O00257 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX4O00257 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.84■□□□□ 0.61
CBX4O00257 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX4O00257 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX4O00257 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CBX4O00257 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX4O00257 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.84■□□□□ 0.61
CBX4O00257 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CBX4O00257 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CBX4O00257 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBX4O00257 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBX4O00257 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBX4O00257 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBX4O00257 AC093503.3-201ENST00000624917 2352 ntBASIC18.83■□□□□ 0.61
CBX4O00257 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CBX4O00257 AC005082.1-201ENST00000413042 2259 ntBASIC18.83■□□□□ 0.61
CBX4O00257 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX4O00257 HBZP1-201ENST00000354915 429 ntBASIC18.83■□□□□ 0.6
CBX4O00257 PCED1CP-201ENST00000419887 785 ntBASIC18.83■□□□□ 0.6
CBX4O00257 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.83■□□□□ 0.6
CBX4O00257 FAM86EP-206ENST00000510506 987 ntBASIC18.83■□□□□ 0.6
CBX4O00257 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.83■□□□□ 0.6
CBX4O00257 AC083849.1-201ENST00000615227 514 ntBASIC18.83■□□□□ 0.6
CBX4O00257 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.83■□□□□ 0.6
CBX4O00257 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.83■□□□□ 0.6
CBX4O00257 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX4O00257 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX4O00257 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.83■□□□□ 0.6
CBX4O00257 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX4O00257 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CBX4O00257 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CBX4O00257 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX4O00257 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX4O00257 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CBX4O00257 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CBX4O00257 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.82■□□□□ 0.6
CBX4O00257 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.82■□□□□ 0.6
CBX4O00257 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.82■□□□□ 0.6
CBX4O00257 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.82■□□□□ 0.6
CBX4O00257 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.82■□□□□ 0.6
CBX4O00257 ZNF444P1-201ENST00000559497 298 ntBASIC18.82■□□□□ 0.6
CBX4O00257 AL136038.4-201ENST00000603606 1261 ntBASIC18.82■□□□□ 0.6
CBX4O00257 AL121956.5-201ENST00000625261 221 ntBASIC18.82■□□□□ 0.6
CBX4O00257 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.82■□□□□ 0.6
CBX4O00257 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.82■□□□□ 0.6
CBX4O00257 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CBX4O00257 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CBX4O00257 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX4O00257 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CBX4O00257 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.81■□□□□ 0.6
CBX4O00257 AL391807.1-203ENST00000604392 2365 ntBASIC18.81■□□□□ 0.6
CBX4O00257 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms