Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYCE3A1L190 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.02■□□□□ 0.95
SYCE3A1L190 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.01■□□□□ 0.95
SYCE3A1L190 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.01■□□□□ 0.95
SYCE3A1L190 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.01■□□□□ 0.95
SYCE3A1L190 BCL2-203ENST00000589955 5011 ntBASIC21.01■□□□□ 0.95
SYCE3A1L190 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SYCE3A1L190 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.01■□□□□ 0.95
SYCE3A1L190 POU5F1P3-201ENST00000428824 1078 ntBASIC21.01■□□□□ 0.95
SYCE3A1L190 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.01■□□□□ 0.95
SYCE3A1L190 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.01■□□□□ 0.95
SYCE3A1L190 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
SYCE3A1L190 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SYCE3A1L190 C1QL1P1-201ENST00000568105 661 ntBASIC21.01■□□□□ 0.95
SYCE3A1L190 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.01■□□□□ 0.95
SYCE3A1L190 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SYCE3A1L190 AL121832.2-201ENST00000610979 668 ntBASIC21.01■□□□□ 0.95
SYCE3A1L190 AC092118.2-201ENST00000613495 667 ntBASIC21.01■□□□□ 0.95
SYCE3A1L190 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.01■□□□□ 0.95
SYCE3A1L190 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.01■□□□□ 0.95
SYCE3A1L190 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SYCE3A1L190 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYCE3A1L190 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYCE3A1L190 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYCE3A1L190 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21■□□□□ 0.95
SYCE3A1L190 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21■□□□□ 0.95
SYCE3A1L190 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYCE3A1L190 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYCE3A1L190 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
SYCE3A1L190 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21■□□□□ 0.95
SYCE3A1L190 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC21■□□□□ 0.95
SYCE3A1L190 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21■□□□□ 0.95
SYCE3A1L190 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SYCE3A1L190 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SYCE3A1L190 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SYCE3A1L190 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYCE3A1L190 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYCE3A1L190 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21■□□□□ 0.95
SYCE3A1L190 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21■□□□□ 0.95
SYCE3A1L190 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYCE3A1L190 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
SYCE3A1L190 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SYCE3A1L190 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.99■□□□□ 0.95
SYCE3A1L190 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SYCE3A1L190 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SYCE3A1L190 KRT8P3-201ENST00000519669 1449 ntBASIC20.99■□□□□ 0.95
SYCE3A1L190 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.99■□□□□ 0.95
SYCE3A1L190 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SYCE3A1L190 MIR663A-201ENST00000385250 93 ntBASIC20.99■□□□□ 0.95
SYCE3A1L190 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.99■□□□□ 0.95
SYCE3A1L190 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.99■□□□□ 0.95
SYCE3A1L190 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.99■□□□□ 0.95
SYCE3A1L190 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 AC073111.5-205ENST00000641717 521 ntBASIC20.99■□□□□ 0.95
SYCE3A1L190 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.99■□□□□ 0.95
SYCE3A1L190 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.99■□□□□ 0.95
SYCE3A1L190 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.99■□□□□ 0.95
SYCE3A1L190 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYCE3A1L190 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.98■□□□□ 0.95
SYCE3A1L190 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYCE3A1L190 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYCE3A1L190 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SYCE3A1L190 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYCE3A1L190 AC006116.8-202ENST00000587620 1550 ntBASIC20.98■□□□□ 0.95
SYCE3A1L190 KRT8P11-201ENST00000409686 1436 ntBASIC20.98■□□□□ 0.95
SYCE3A1L190 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SYCE3A1L190 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYCE3A1L190 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYCE3A1L190 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.98■□□□□ 0.95
SYCE3A1L190 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYCE3A1L190 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms