Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 KRT18P41-201ENST00000518924 1277 ntBASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 AC069236.1-201ENST00000604339 616 ntBASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV1-1A0A0B4J248 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 AC005829.2-201ENST00000571422 1056 ntBASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 GMCL1P1-201ENST00000463439 1581 ntBASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRAV1-1A0A0B4J248 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 PHGDH-209ENST00000641074 1780 ntBASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAV1-1A0A0B4J248 RAP2CP1-201ENST00000605103 478 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms