Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 AC112777.1-201ENST00000540175 1423 ntBASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 AC034236.2-201ENST00000606662 1610 ntBASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 AC005082.1-201ENST00000413042 2259 ntBASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL4A3BPQ9Y5P4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 SPDYE15P-201ENST00000424157 909 ntBASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 KRT18P41-201ENST00000518924 1277 ntBASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 AC090164.3-201ENST00000610780 2143 ntBASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
COL4A3BPQ9Y5P4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
COL4A3BPQ9Y5P4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
COL4A3BPQ9Y5P4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
COL4A3BPQ9Y5P4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
COL4A3BPQ9Y5P4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 AC112907.2-201ENST00000448639 330 ntBASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 AC112497.1-201ENST00000624824 639 ntBASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL4A3BPQ9Y5P4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 AL121956.5-201ENST00000625261 221 ntBASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.63■□□□□ 0.89
COL4A3BPQ9Y5P4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms