Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
MACF1Q9UPN3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC7.54□□□□□ -1.2
MACF1Q9UPN3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC7.54□□□□□ -1.2
MACF1Q9UPN3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC7.54□□□□□ -1.2
MACF1Q9UPN3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC7.54□□□□□ -1.2
MACF1Q9UPN3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
MACF1Q9UPN3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
MACF1Q9UPN3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
MACF1Q9UPN3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC7.54□□□□□ -1.2
MACF1Q9UPN3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC7.54□□□□□ -1.2
MACF1Q9UPN3 REXO1L3P-201ENST00000622202 1288 ntBASIC7.54□□□□□ -1.2
MACF1Q9UPN3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC7.54□□□□□ -1.2
MACF1Q9UPN3 KRT8P44-201ENST00000441609 1350 ntBASIC7.54□□□□□ -1.2
MACF1Q9UPN3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
MACF1Q9UPN3 FXNP2-201ENST00000411625 547 ntBASIC7.54□□□□□ -1.2
MACF1Q9UPN3 BNIP3P42-201ENST00000454982 569 ntBASIC7.54□□□□□ -1.2
MACF1Q9UPN3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC7.54□□□□□ -1.2
MACF1Q9UPN3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC7.54□□□□□ -1.2
MACF1Q9UPN3 BNIP3P29-201ENST00000598302 571 ntBASIC7.54□□□□□ -1.2
MACF1Q9UPN3 AC011447.5-201ENST00000616168 564 ntBASIC7.54□□□□□ -1.2
MACF1Q9UPN3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC7.54□□□□□ -1.2
MACF1Q9UPN3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 AC008677.1-201ENST00000519230 1561 ntBASIC7.53□□□□□ -1.2
MACF1Q9UPN3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 MIR6869-201ENST00000619434 62 ntBASIC7.53□□□□□ -1.2
MACF1Q9UPN3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 AC099568.2-201ENST00000609194 695 ntBASIC7.53□□□□□ -1.2
MACF1Q9UPN3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 CRYGEP-201ENST00000412192 528 ntBASIC7.53□□□□□ -1.2
MACF1Q9UPN3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 HNRNPUP1-201ENST00000554987 333 ntBASIC7.53□□□□□ -1.2
MACF1Q9UPN3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 DDT-204ENST00000404092 805 ntTSL 3 BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 MIR3180-4-201ENST00000582223 153 ntBASIC7.53□□□□□ -1.2
MACF1Q9UPN3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
MACF1Q9UPN3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
MACF1Q9UPN3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
MACF1Q9UPN3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
MACF1Q9UPN3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
MACF1Q9UPN3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 AC136632.2-201ENST00000512891 861 ntBASIC7.52□□□□□ -1.21
MACF1Q9UPN3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 CD63-210ENST00000550776 870 ntTSL 5 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
MACF1Q9UPN3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms