Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 HTR7P1-201ENST00000538670 1336 ntBASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 SDHAP1-207ENST00000440850 2000 ntBASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 AC133681.1-201ENST00000465482 601 ntBASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.8■□□□□ 0.6
ABCF3Q9NUQ8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 AC080080.1-201ENST00000625121 2420 ntBASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 GCSHP5-201ENST00000443090 522 ntBASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCF3Q9NUQ8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 AL162741.1-201ENST00000565563 1558 ntBASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ABCF3Q9NUQ8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.77■□□□□ 0.6
ABCF3Q9NUQ8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ABCF3Q9NUQ8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ABCF3Q9NUQ8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ABCF3Q9NUQ8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
ABCF3Q9NUQ8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.77■□□□□ 0.6
ABCF3Q9NUQ8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ABCF3Q9NUQ8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ABCF3Q9NUQ8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ABCF3Q9NUQ8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ABCF3Q9NUQ8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ABCF3Q9NUQ8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
ABCF3Q9NUQ8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms