Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 AL390961.4-201ENST00000623958 2535 ntBASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BLOC1S4Q9NUP1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 KRT18P57-201ENST00000443599 1254 ntBASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 MIR3917-201ENST00000580971 93 ntBASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 AC007613.1-201ENST00000572811 2597 ntBASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
BLOC1S4Q9NUP1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 LIN28AP1-201ENST00000429574 405 ntBASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 AL157888.1-201ENST00000631930 593 ntBASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 ABALON-201ENST00000629058 1903 ntBASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 LINC01126-201ENST00000623515 1646 ntBASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
BLOC1S4Q9NUP1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 AP000523.1-201ENST00000398242 1049 ntBASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 AC117947.1-201ENST00000427448 529 ntBASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 ATP5G1P1-201ENST00000448724 379 ntBASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 COX11P1-201ENST00000489116 835 ntBASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 AC139887.4-201ENST00000607877 719 ntBASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 AC011558.1-201ENST00000623459 338 ntBASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.52■□□□□ 0.88
BLOC1S4Q9NUP1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms