Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 PHGDH-209ENST00000641074 1780 ntBASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A13Q9NSD5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 MFAP1P1-201ENST00000442257 1255 ntBASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 MIR4674-201ENST00000582457 87 ntBASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 FAM197Y4-202ENST00000622692 608 ntBASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC6A13Q9NSD5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 GNAS-203ENST00000306120 1878 ntBASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 MCCD1P1-208ENST00000445732 328 ntBASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 AC116562.2-201ENST00000507042 360 ntBASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 SLC25A1P4-201ENST00000567977 778 ntBASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A13Q9NSD5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.38
SLC6A13Q9NSD5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC6A13Q9NSD5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC6A13Q9NSD5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC6A13Q9NSD5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A13Q9NSD5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A13Q9NSD5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC6A13Q9NSD5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A13Q9NSD5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SLC6A13Q9NSD5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC6A13Q9NSD5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms