Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.78■■□□□ 1.08
RTN4Q9NQC3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 AC013268.1-206ENST00000638368 961 ntBASIC21.77■■□□□ 1.08
RTN4Q9NQC3 AC112229.1-201ENST00000639295 961 ntBASIC21.77■■□□□ 1.08
RTN4Q9NQC3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTN4Q9NQC3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RTN4Q9NQC3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.77■■□□□ 1.07
RTN4Q9NQC3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.76■■□□□ 1.07
RTN4Q9NQC3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 AL031963.3-201ENST00000606441 850 ntBASIC21.76■■□□□ 1.07
RTN4Q9NQC3 AC100791.3-201ENST00000617619 330 ntBASIC21.76■■□□□ 1.07
RTN4Q9NQC3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTN4Q9NQC3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 AC145098.2-201ENST00000623593 3026 ntBASIC21.75■■□□□ 1.07
RTN4Q9NQC3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTN4Q9NQC3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms