Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CNTNAP4Q9C0A0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC23.22■■□□□ 1.31
CNTNAP4Q9C0A0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CNTNAP4Q9C0A0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC23.22■■□□□ 1.31
CNTNAP4Q9C0A0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CNTNAP4Q9C0A0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 MTCL1P1-201ENST00000446207 792 ntBASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 AC027601.4-201ENST00000611259 610 ntBASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 FAM197Y3-203ENST00000618346 717 ntBASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNTNAP4Q9C0A0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CNTNAP4Q9C0A0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.31
CNTNAP4Q9C0A0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC23.2■■□□□ 1.31
CNTNAP4Q9C0A0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 LBH-204ENST00000406087 559 ntTSL 4 BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 ABCD1P5-201ENST00000445663 754 ntBASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 AC034105.1-201ENST00000563488 319 ntBASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 AC140113.2-201ENST00000604370 208 ntBASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNTNAP4Q9C0A0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 RPS2P1-201ENST00000434010 821 ntBASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC23.19■■□□□ 1.3
CNTNAP4Q9C0A0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 AC083906.6-201ENST00000641366 219 ntBASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 SDHAP2-201ENST00000455183 2001 ntBASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CNTNAP4Q9C0A0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms