Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 EIF1AD-207ENST00000529964 808 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AC068620.3-201ENST00000602749 560 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 LSM1P2-201ENST00000604911 322 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 BNIP3P7-201ENST00000605641 516 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 OR2AS2P-201ENST00000606902 342 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AC018926.1-201ENST00000616335 435 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AL590240.3-201ENST00000621416 943 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AC007683.2-201ENST00000624681 714 ntBASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 RTN3-204ENST00000354497 1407 ntTSL 2 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
KRTAP3-3Q9BYR6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 CD244-201ENST00000322302 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 QRFPR-201ENST00000334383 1215 ntTSL 2 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 RPS3AP26-201ENST00000398259 784 ntBASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 KRTAP9-3-201ENST00000411528 992 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 AC026369.3-201ENST00000540226 586 ntTSL 2 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 AC133065.4-201ENST00000570440 1159 ntBASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 DPRXP4-201ENST00000578053 568 ntBASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 BRCA1-226ENST00000591534 1282 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 AC011523.1-201ENST00000598079 392 ntTSL 3 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 AC138627.1-201ENST00000641127 1257 ntBASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 NRXN1-203ENST00000378262 1338 ntTSL 2 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 AL121985.1-202ENST00000443928 1370 ntTSL 3 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 SPATA22-209ENST00000572969 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 CDY10P-201ENST00000452415 1567 ntBASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 RPL32P3-205ENST00000507287 1555 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 HLA-L-211ENST00000482052 1765 ntBASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
KRTAP3-3Q9BYR6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 FGF7P2-201ENST00000332473 296 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 FAM166A-201ENST00000344774 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 Y_RNA.248-201ENST00000364501 109 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 OR7E115P-201ENST00000382617 1024 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 PRKCE-202ENST00000394874 996 ntTSL 3 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 OR2L1P-201ENST00000422727 938 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 RPF2P1-201ENST00000424137 906 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 TM2D3-203ENST00000428002 1267 ntTSL 2 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 RPL22P11-201ENST00000434894 385 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 MTCO2P16-201ENST00000436962 677 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 LINC01803-201ENST00000438659 613 ntTSL 2 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 SEPT14P12-201ENST00000442280 560 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 ZNF90P3-201ENST00000450345 1192 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 RPS3AP43-201ENST00000479743 781 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 RPS3AP22-201ENST00000488297 769 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 AC111000.2-201ENST00000507775 550 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 RNU6-319P-201ENST00000516025 108 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 AP004607.6-201ENST00000525033 1202 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 CENPUP1-201ENST00000526649 1202 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 AL121579.1-201ENST00000555129 305 ntBASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC11.48□□□□□ -0.57
KRTAP3-3Q9BYR6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms