Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 AL049812.1-201ENST00000432563 2267 ntBASIC19.25■□□□□ 0.67
LRRC3Q9BY71 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 AC004870.1-201ENST00000315132 882 ntBASIC19.25■□□□□ 0.67
LRRC3Q9BY71 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 KRT17P6-201ENST00000453795 1220 ntBASIC19.25■□□□□ 0.67
LRRC3Q9BY71 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 FOSL1P1-201ENST00000511041 816 ntBASIC19.25■□□□□ 0.67
LRRC3Q9BY71 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 AC009065.1-201ENST00000564055 1225 ntBASIC19.25■□□□□ 0.67
LRRC3Q9BY71 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 AC018445.3-201ENST00000624177 1945 ntBASIC19.25■□□□□ 0.67
LRRC3Q9BY71 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRRC3Q9BY71 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 BX323043.1-201ENST00000641006 1765 ntBASIC19.24■□□□□ 0.67
LRRC3Q9BY71 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 AP000593.1-201ENST00000393668 712 ntBASIC19.24■□□□□ 0.67
LRRC3Q9BY71 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 IGHV3-47-201ENST00000425060 335 ntBASIC19.24■□□□□ 0.67
LRRC3Q9BY71 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 FAAHP1-202ENST00000446499 1238 ntBASIC19.24■□□□□ 0.67
LRRC3Q9BY71 EMBP1-201ENST00000458200 901 ntBASIC19.24■□□□□ 0.67
LRRC3Q9BY71 KRT18P31-201ENST00000506277 1292 ntBASIC19.24■□□□□ 0.67
LRRC3Q9BY71 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 AL592071.1-201ENST00000611956 408 ntBASIC19.24■□□□□ 0.67
LRRC3Q9BY71 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 AC083906.6-201ENST00000641366 219 ntBASIC19.24■□□□□ 0.67
LRRC3Q9BY71 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LRRC3Q9BY71 AL353692.3-201ENST00000407031 1396 ntBASIC19.23■□□□□ 0.67
LRRC3Q9BY71 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 AC104692.2-201ENST00000603054 253 ntBASIC19.23■□□□□ 0.67
LRRC3Q9BY71 AL121772.3-201ENST00000610840 674 ntBASIC19.23■□□□□ 0.67
LRRC3Q9BY71 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.23■□□□□ 0.67
LRRC3Q9BY71 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC3Q9BY71 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC3Q9BY71 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.22■□□□□ 0.67
LRRC3Q9BY71 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC3Q9BY71 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC3Q9BY71 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC3Q9BY71 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
LRRC3Q9BY71 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC3Q9BY71 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC3Q9BY71 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC3Q9BY71 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC3Q9BY71 AC104819.1-201ENST00000504587 486 ntBASIC19.22■□□□□ 0.67
LRRC3Q9BY71 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC3Q9BY71 AC091304.2-201ENST00000564639 760 ntBASIC19.22■□□□□ 0.67
LRRC3Q9BY71 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.22■□□□□ 0.67
LRRC3Q9BY71 AC074051.2-201ENST00000565115 352 ntBASIC19.22■□□□□ 0.67
LRRC3Q9BY71 AP005901.3-202ENST00000581653 237 ntBASIC19.22■□□□□ 0.67
LRRC3Q9BY71 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms