Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 ANO7L1-203ENST00000602586 1720 ntBASIC17.47■□□□□ 0.39
TUBA1CQ9BQE3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TUBA1CQ9BQE3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TUBA1CQ9BQE3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 UNC93B2-201ENST00000285383 730 ntBASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 KRT8P8-201ENST00000434750 1448 ntBASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TUBA1CQ9BQE3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.46■□□□□ 0.38
TUBA1CQ9BQE3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.46■□□□□ 0.38
TUBA1CQ9BQE3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TUBA1CQ9BQE3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 AC004980.1-204ENST00000429707 299 ntBASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 LINC01023-201ENST00000606054 436 ntBASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 AP000525.1-201ENST00000608286 694 ntBASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 AC133561.5-201ENST00000635547 218 ntBASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 HLA-A-209ENST00000638375 975 ntBASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TUBA1CQ9BQE3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 MMP23A-201ENST00000234610 1017 ntBASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 AC026271.3-201ENST00000571884 352 ntBASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 AC131212.4-201ENST00000623606 975 ntBASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.44■□□□□ 0.38
TUBA1CQ9BQE3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TUBA1CQ9BQE3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms