Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXC2Q99958 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
FOXC2Q99958 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXC2Q99958 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXC2Q99958 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXC2Q99958 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXC2Q99958 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXC2Q99958 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXC2Q99958 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXC2Q99958 AC104109.2-201ENST00000602919 1418 ntBASIC15.53■□□□□ 0.08
FOXC2Q99958 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXC2Q99958 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
FOXC2Q99958 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.53■□□□□ 0.08
FOXC2Q99958 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXC2Q99958 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXC2Q99958 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXC2Q99958 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXC2Q99958 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXC2Q99958 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXC2Q99958 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXC2Q99958 AC004967.1-201ENST00000453589 447 ntBASIC15.53■□□□□ 0.08
FOXC2Q99958 FGFR3P6-201ENST00000457012 610 ntBASIC15.53■□□□□ 0.08
FOXC2Q99958 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.53■□□□□ 0.08
FOXC2Q99958 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXC2Q99958 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.53■□□□□ 0.08
FOXC2Q99958 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXC2Q99958 AL356488.2-201ENST00000602755 427 ntBASIC15.53■□□□□ 0.08
FOXC2Q99958 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
FOXC2Q99958 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.53■□□□□ 0.08
FOXC2Q99958 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXC2Q99958 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXC2Q99958 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXC2Q99958 RCC2P3-201ENST00000418112 1537 ntBASIC15.53■□□□□ 0.08
FOXC2Q99958 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.53■□□□□ 0.08
FOXC2Q99958 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXC2Q99958 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXC2Q99958 AC007952.6-201ENST00000573168 2673 ntBASIC15.52■□□□□ 0.08
FOXC2Q99958 AC003957.1-201ENST00000625108 2673 ntBASIC15.52■□□□□ 0.08
FOXC2Q99958 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXC2Q99958 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
FOXC2Q99958 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXC2Q99958 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXC2Q99958 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
FOXC2Q99958 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
FOXC2Q99958 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXC2Q99958 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.52■□□□□ 0.08
FOXC2Q99958 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXC2Q99958 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
FOXC2Q99958 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
FOXC2Q99958 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXC2Q99958 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.52■□□□□ 0.08
FOXC2Q99958 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
FOXC2Q99958 HNRNPDP1-201ENST00000439535 754 ntBASIC15.52■□□□□ 0.08
FOXC2Q99958 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
FOXC2Q99958 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
FOXC2Q99958 IGHV3-22-201ENST00000520721 359 ntBASIC15.52■□□□□ 0.08
FOXC2Q99958 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.52■□□□□ 0.08
FOXC2Q99958 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.52■□□□□ 0.08
FOXC2Q99958 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXC2Q99958 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXC2Q99958 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXC2Q99958 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXC2Q99958 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
FOXC2Q99958 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
FOXC2Q99958 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXC2Q99958 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXC2Q99958 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXC2Q99958 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
FOXC2Q99958 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXC2Q99958 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXC2Q99958 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
FOXC2Q99958 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXC2Q99958 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXC2Q99958 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXC2Q99958 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXC2Q99958 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
FOXC2Q99958 AC008556.1-201ENST00000610908 2040 ntBASIC15.51■□□□□ 0.07
FOXC2Q99958 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXC2Q99958 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXC2Q99958 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.51■□□□□ 0.07
FOXC2Q99958 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXC2Q99958 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
FOXC2Q99958 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXC2Q99958 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXC2Q99958 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXC2Q99958 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXC2Q99958 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXC2Q99958 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.51■□□□□ 0.07
FOXC2Q99958 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.51■□□□□ 0.07
FOXC2Q99958 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXC2Q99958 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.51■□□□□ 0.07
FOXC2Q99958 RPS8P6-201ENST00000426177 609 ntBASIC15.51■□□□□ 0.07
FOXC2Q99958 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms