Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.54■□□□□ 0.56
NDNQ99608 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.54■□□□□ 0.56
NDNQ99608 AP001412.1-201ENST00000608405 714 ntBASIC18.54■□□□□ 0.56
NDNQ99608 AC026471.5-201ENST00000615068 467 ntBASIC18.54■□□□□ 0.56
NDNQ99608 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.54■□□□□ 0.56
NDNQ99608 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
NDNQ99608 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDNQ99608 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NDNQ99608 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.53■□□□□ 0.56
NDNQ99608 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
NDNQ99608 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NDNQ99608 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NDNQ99608 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NDNQ99608 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
NDNQ99608 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.53■□□□□ 0.56
NDNQ99608 CRYGFP-201ENST00000418459 633 ntBASIC18.53■□□□□ 0.56
NDNQ99608 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.53■□□□□ 0.56
NDNQ99608 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.53■□□□□ 0.56
NDNQ99608 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.53■□□□□ 0.56
NDNQ99608 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.53■□□□□ 0.56
NDNQ99608 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
NDNQ99608 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NDNQ99608 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NDNQ99608 GPAT2P1-201ENST00000444924 1672 ntBASIC18.53■□□□□ 0.56
NDNQ99608 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
NDNQ99608 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NDNQ99608 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDNQ99608 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.53■□□□□ 0.56
NDNQ99608 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.52■□□□□ 0.56
NDNQ99608 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.52■□□□□ 0.56
NDNQ99608 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.52■□□□□ 0.56
NDNQ99608 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.52■□□□□ 0.56
NDNQ99608 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.52■□□□□ 0.56
NDNQ99608 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.52■□□□□ 0.56
NDNQ99608 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.52■□□□□ 0.56
NDNQ99608 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
NDNQ99608 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.52■□□□□ 0.56
NDNQ99608 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.52■□□□□ 0.56
NDNQ99608 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.52■□□□□ 0.56
NDNQ99608 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
NDNQ99608 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDNQ99608 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
NDNQ99608 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
NDNQ99608 TNRC18P3-201ENST00000441896 2691 ntBASIC18.52■□□□□ 0.55
NDNQ99608 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NDNQ99608 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NDNQ99608 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.52■□□□□ 0.55
NDNQ99608 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
NDNQ99608 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDNQ99608 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDNQ99608 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.51■□□□□ 0.55
NDNQ99608 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
NDNQ99608 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.51■□□□□ 0.55
NDNQ99608 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NDNQ99608 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.51■□□□□ 0.55
NDNQ99608 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.51■□□□□ 0.55
NDNQ99608 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NDNQ99608 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.51■□□□□ 0.55
NDNQ99608 TSPY7P-201ENST00000431358 1114 ntBASIC18.51■□□□□ 0.55
NDNQ99608 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms