Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 AC018553.1-201ENST00000616682 1458 ntBASIC17.42■□□□□ 0.38
NR1H4Q96RI1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 DUX4L2-201ENST00000561772 1275 ntBASIC17.41■□□□□ 0.38
NR1H4Q96RI1 AP001160.3-201ENST00000601484 763 ntBASIC17.41■□□□□ 0.38
NR1H4Q96RI1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 DUX4L6-201ENST00000626483 1275 ntBASIC17.41■□□□□ 0.38
NR1H4Q96RI1 DUX4L1-201ENST00000627662 1275 ntBASIC17.41■□□□□ 0.38
NR1H4Q96RI1 DUX4L8-201ENST00000629013 1275 ntBASIC17.41■□□□□ 0.38
NR1H4Q96RI1 DUX4L3-201ENST00000630187 1275 ntBASIC17.41■□□□□ 0.38
NR1H4Q96RI1 DUX4L7-201ENST00000630678 1275 ntBASIC17.41■□□□□ 0.38
NR1H4Q96RI1 DUX4L5-201ENST00000630834 1275 ntBASIC17.41■□□□□ 0.38
NR1H4Q96RI1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H4Q96RI1 DOC2GP-204ENST00000639052 2548 ntBASIC17.41■□□□□ 0.38
NR1H4Q96RI1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 TERF1P2-201ENST00000583350 1212 ntBASIC17.4■□□□□ 0.38
NR1H4Q96RI1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H4Q96RI1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NR1H4Q96RI1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NR1H4Q96RI1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
NR1H4Q96RI1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NR1H4Q96RI1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NR1H4Q96RI1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
NR1H4Q96RI1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 FLJ38576-201ENST00000623820 2459 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms