Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX27Q96L92 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX27Q96L92 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX27Q96L92 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SNX27Q96L92 KRT18P13-201ENST00000400056 1290 ntBASIC19.9■□□□□ 0.78
SNX27Q96L92 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX27Q96L92 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
SNX27Q96L92 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX27Q96L92 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.9■□□□□ 0.78
SNX27Q96L92 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNX27Q96L92 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX27Q96L92 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX27Q96L92 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNX27Q96L92 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX27Q96L92 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX27Q96L92 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNX27Q96L92 AL031598.1-201ENST00000561511 1773 ntBASIC19.9■□□□□ 0.78
SNX27Q96L92 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX27Q96L92 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX27Q96L92 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX27Q96L92 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX27Q96L92 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX27Q96L92 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX27Q96L92 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX27Q96L92 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX27Q96L92 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX27Q96L92 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SNX27Q96L92 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX27Q96L92 RN7SL510P-201ENST00000581311 263 ntBASIC19.89■□□□□ 0.77
SNX27Q96L92 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SNX27Q96L92 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX27Q96L92 AC024563.2-201ENST00000603282 481 ntBASIC19.89■□□□□ 0.77
SNX27Q96L92 AL121672.3-201ENST00000608644 468 ntBASIC19.89■□□□□ 0.77
SNX27Q96L92 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX27Q96L92 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX27Q96L92 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.89■□□□□ 0.77
SNX27Q96L92 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.88■□□□□ 0.77
SNX27Q96L92 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SNX27Q96L92 AC016734.2-201ENST00000624325 1377 ntBASIC19.88■□□□□ 0.77
SNX27Q96L92 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 ATP5G2P1-201ENST00000433580 426 ntBASIC19.88■□□□□ 0.77
SNX27Q96L92 KRT17P6-201ENST00000453795 1220 ntBASIC19.88■□□□□ 0.77
SNX27Q96L92 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.88■□□□□ 0.77
SNX27Q96L92 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 AP003733.1-201ENST00000491725 852 ntBASIC19.88■□□□□ 0.77
SNX27Q96L92 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.88■□□□□ 0.77
SNX27Q96L92 KRT8P26-201ENST00000534154 1276 ntBASIC19.88■□□□□ 0.77
SNX27Q96L92 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.88■□□□□ 0.77
SNX27Q96L92 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.88■□□□□ 0.77
SNX27Q96L92 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 AL390719.2-201ENST00000606993 987 ntBASIC19.88■□□□□ 0.77
SNX27Q96L92 NPAP1P7-201ENST00000613027 823 ntBASIC19.88■□□□□ 0.77
SNX27Q96L92 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 SDHAP2-201ENST00000455183 2001 ntBASIC19.88■□□□□ 0.77
SNX27Q96L92 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 CROCCP3-202ENST00000420820 1947 ntBASIC19.88■□□□□ 0.77
SNX27Q96L92 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SNX27Q96L92 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX27Q96L92 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX27Q96L92 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
SNX27Q96L92 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX27Q96L92 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX27Q96L92 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX27Q96L92 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX27Q96L92 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SNX27Q96L92 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.87■□□□□ 0.77
SNX27Q96L92 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SNX27Q96L92 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.87■□□□□ 0.77
SNX27Q96L92 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SNX27Q96L92 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX27Q96L92 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX27Q96L92 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX27Q96L92 TSPY22P-201ENST00000427496 604 ntBASIC19.87■□□□□ 0.77
SNX27Q96L92 TSSC2-201ENST00000450217 709 ntBASIC19.87■□□□□ 0.77
SNX27Q96L92 BX276092.5-203ENST00000456199 560 ntBASIC19.87■□□□□ 0.77
SNX27Q96L92 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX27Q96L92 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX27Q96L92 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.87■□□□□ 0.77
SNX27Q96L92 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SNX27Q96L92 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX27Q96L92 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.87■□□□□ 0.77
SNX27Q96L92 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX27Q96L92 AC099343.3-201ENST00000605834 2503 ntBASIC19.87■□□□□ 0.77
SNX27Q96L92 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.87■□□□□ 0.77
SNX27Q96L92 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX27Q96L92 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX27Q96L92 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX27Q96L92 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms