Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.52■□□□□ 0.08
TIMD4Q96H15 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TIMD4Q96H15 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TIMD4Q96H15 AC116562.4-201ENST00000641316 2276 ntBASIC15.52■□□□□ 0.08
TIMD4Q96H15 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.52■□□□□ 0.08
TIMD4Q96H15 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
TIMD4Q96H15 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TIMD4Q96H15 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TIMD4Q96H15 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.52■□□□□ 0.08
TIMD4Q96H15 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TIMD4Q96H15 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.52■□□□□ 0.08
TIMD4Q96H15 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
TIMD4Q96H15 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TIMD4Q96H15 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TIMD4Q96H15 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TIMD4Q96H15 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TIMD4Q96H15 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.52■□□□□ 0.08
TIMD4Q96H15 AC092597.1-201ENST00000487352 616 ntBASIC15.52■□□□□ 0.08
TIMD4Q96H15 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.52■□□□□ 0.08
TIMD4Q96H15 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.52■□□□□ 0.08
TIMD4Q96H15 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TIMD4Q96H15 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
TIMD4Q96H15 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.52■□□□□ 0.08
TIMD4Q96H15 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TIMD4Q96H15 AC093458.2-201ENST00000623150 629 ntBASIC15.52■□□□□ 0.08
TIMD4Q96H15 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.52■□□□□ 0.08
TIMD4Q96H15 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TIMD4Q96H15 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
TIMD4Q96H15 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TIMD4Q96H15 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.52■□□□□ 0.07
TIMD4Q96H15 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
TIMD4Q96H15 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TIMD4Q96H15 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TIMD4Q96H15 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TIMD4Q96H15 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.51■□□□□ 0.07
TIMD4Q96H15 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.51■□□□□ 0.07
TIMD4Q96H15 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TIMD4Q96H15 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.51■□□□□ 0.07
TIMD4Q96H15 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.51■□□□□ 0.07
TIMD4Q96H15 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.51■□□□□ 0.07
TIMD4Q96H15 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.51■□□□□ 0.07
TIMD4Q96H15 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TIMD4Q96H15 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TIMD4Q96H15 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TIMD4Q96H15 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TIMD4Q96H15 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.51■□□□□ 0.07
TIMD4Q96H15 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.51■□□□□ 0.07
TIMD4Q96H15 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMD4Q96H15 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TIMD4Q96H15 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TIMD4Q96H15 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.5■□□□□ 0.07
TIMD4Q96H15 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMD4Q96H15 AL391807.1-203ENST00000604392 2365 ntBASIC15.5■□□□□ 0.07
TIMD4Q96H15 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TIMD4Q96H15 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMD4Q96H15 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.5■□□□□ 0.07
TIMD4Q96H15 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TIMD4Q96H15 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TIMD4Q96H15 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMD4Q96H15 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMD4Q96H15 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TIMD4Q96H15 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TIMD4Q96H15 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMD4Q96H15 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMD4Q96H15 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.5■□□□□ 0.07
TIMD4Q96H15 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.5■□□□□ 0.07
TIMD4Q96H15 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TIMD4Q96H15 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TIMD4Q96H15 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.5■□□□□ 0.07
TIMD4Q96H15 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.5■□□□□ 0.07
TIMD4Q96H15 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TIMD4Q96H15 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.5■□□□□ 0.07
TIMD4Q96H15 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.5■□□□□ 0.07
TIMD4Q96H15 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TIMD4Q96H15 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms