Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
DDX11Q96FC9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.94■■□□□ 1.1
DDX11Q96FC9 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.94■■□□□ 1.1
DDX11Q96FC9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.94■■□□□ 1.1
DDX11Q96FC9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
DDX11Q96FC9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 AC126763.1-201ENST00000552015 2118 ntBASIC21.94■■□□□ 1.1
DDX11Q96FC9 AC090164.3-201ENST00000610780 2143 ntBASIC21.94■■□□□ 1.1
DDX11Q96FC9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX11Q96FC9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
DDX11Q96FC9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX11Q96FC9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX11Q96FC9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX11Q96FC9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.93■■□□□ 1.1
DDX11Q96FC9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX11Q96FC9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX11Q96FC9 MTMR9LP-203ENST00000426597 1545 ntBASIC21.93■■□□□ 1.1
DDX11Q96FC9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
DDX11Q96FC9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX11Q96FC9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX11Q96FC9 HOMER2P1-201ENST00000455653 964 ntBASIC21.93■■□□□ 1.1
DDX11Q96FC9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.93■■□□□ 1.1
DDX11Q96FC9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.93■■□□□ 1.1
DDX11Q96FC9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.93■■□□□ 1.1
DDX11Q96FC9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.93■■□□□ 1.1
DDX11Q96FC9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.93■■□□□ 1.1
DDX11Q96FC9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX11Q96FC9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX11Q96FC9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.93■■□□□ 1.1
DDX11Q96FC9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.93■■□□□ 1.1
DDX11Q96FC9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.93■■□□□ 1.1
DDX11Q96FC9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX11Q96FC9 AL023973.1-201ENST00000624619 620 ntBASIC21.93■■□□□ 1.1
DDX11Q96FC9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
DDX11Q96FC9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.92■■□□□ 1.1
DDX11Q96FC9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.92■■□□□ 1.1
DDX11Q96FC9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.92■■□□□ 1.1
DDX11Q96FC9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.92■■□□□ 1.1
DDX11Q96FC9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.92■■□□□ 1.1
DDX11Q96FC9 KRT8P3-201ENST00000519669 1449 ntBASIC21.92■■□□□ 1.1
DDX11Q96FC9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.92■■□□□ 1.1
DDX11Q96FC9 AC068587.9-201ENST00000641814 219 ntBASIC21.92■■□□□ 1.1
DDX11Q96FC9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
DDX11Q96FC9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
DDX11Q96FC9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.92■■□□□ 1.1
DDX11Q96FC9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX11Q96FC9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.92■■□□□ 1.1
DDX11Q96FC9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX11Q96FC9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.91■■□□□ 1.1
DDX11Q96FC9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.91■■□□□ 1.1
DDX11Q96FC9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX11Q96FC9 KRT8P32-201ENST00000512863 1461 ntBASIC21.91■■□□□ 1.1
DDX11Q96FC9 KRT8P45-201ENST00000414328 1447 ntBASIC21.91■■□□□ 1.1
DDX11Q96FC9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX11Q96FC9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX11Q96FC9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.91■■□□□ 1.1
DDX11Q96FC9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX11Q96FC9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.91■■□□□ 1.1
DDX11Q96FC9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX11Q96FC9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX11Q96FC9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.91■■□□□ 1.1
DDX11Q96FC9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX11Q96FC9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX11Q96FC9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.91■■□□□ 1.1
DDX11Q96FC9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.91■■□□□ 1.1
DDX11Q96FC9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX11Q96FC9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX11Q96FC9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX11Q96FC9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.91■■□□□ 1.1
DDX11Q96FC9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX11Q96FC9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
DDX11Q96FC9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX11Q96FC9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
DDX11Q96FC9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX11Q96FC9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.9■■□□□ 1.1
DDX11Q96FC9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX11Q96FC9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.9■■□□□ 1.1
DDX11Q96FC9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX11Q96FC9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms