Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM11Q96F44 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TRIM11Q96F44 TSPY7P-201ENST00000431358 1114 ntBASIC19.55■□□□□ 0.72
TRIM11Q96F44 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.55■□□□□ 0.72
TRIM11Q96F44 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM11Q96F44 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.55■□□□□ 0.72
TRIM11Q96F44 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRIM11Q96F44 AP003041.3-201ENST00000527151 707 ntBASIC19.55■□□□□ 0.72
TRIM11Q96F44 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.55■□□□□ 0.72
TRIM11Q96F44 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM11Q96F44 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM11Q96F44 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM11Q96F44 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM11Q96F44 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TRIM11Q96F44 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM11Q96F44 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRIM11Q96F44 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
TRIM11Q96F44 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM11Q96F44 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 KRT17P2-201ENST00000300992 1314 ntBASIC19.54■□□□□ 0.72
TRIM11Q96F44 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM11Q96F44 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.54■□□□□ 0.72
TRIM11Q96F44 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM11Q96F44 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM11Q96F44 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
TRIM11Q96F44 BX088651.1-201ENST00000540551 451 ntBASIC19.54■□□□□ 0.72
TRIM11Q96F44 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.54■□□□□ 0.72
TRIM11Q96F44 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 C2orf69P3-201ENST00000565542 1120 ntBASIC19.54■□□□□ 0.72
TRIM11Q96F44 WWOX-216ENST00000569818 525 ntBASIC19.54■□□□□ 0.72
TRIM11Q96F44 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM11Q96F44 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM11Q96F44 AP000525.1-201ENST00000608286 694 ntBASIC19.54■□□□□ 0.72
TRIM11Q96F44 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM11Q96F44 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM11Q96F44 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM11Q96F44 AC116562.4-202ENST00000641738 218 ntBASIC19.54■□□□□ 0.72
TRIM11Q96F44 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.54■□□□□ 0.72
TRIM11Q96F44 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TRIM11Q96F44 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM11Q96F44 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM11Q96F44 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM11Q96F44 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM11Q96F44 GMCL1P1-201ENST00000463439 1581 ntBASIC19.53■□□□□ 0.72
TRIM11Q96F44 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRIM11Q96F44 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM11Q96F44 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM11Q96F44 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM11Q96F44 AC092338.2-201ENST00000568827 1415 ntBASIC19.53■□□□□ 0.72
TRIM11Q96F44 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRIM11Q96F44 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM11Q96F44 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM11Q96F44 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM11Q96F44 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM11Q96F44 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM11Q96F44 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM11Q96F44 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM11Q96F44 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM11Q96F44 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM11Q96F44 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM11Q96F44 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM11Q96F44 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM11Q96F44 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM11Q96F44 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM11Q96F44 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRIM11Q96F44 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM11Q96F44 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM11Q96F44 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TRIM11Q96F44 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRIM11Q96F44 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRIM11Q96F44 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM11Q96F44 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM11Q96F44 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM11Q96F44 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM11Q96F44 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM11Q96F44 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM11Q96F44 AC009065.1-201ENST00000564055 1225 ntBASIC19.52■□□□□ 0.72
TRIM11Q96F44 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM11Q96F44 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TRIM11Q96F44 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRIM11Q96F44 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM11Q96F44 NOC2LP2-201ENST00000407594 1944 ntBASIC19.52■□□□□ 0.72
TRIM11Q96F44 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms