Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHD6Q8TD26 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHD6Q8TD26 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CHD6Q8TD26 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.56■□□□□ 0.24
CHD6Q8TD26 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.56■□□□□ 0.24
CHD6Q8TD26 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.56■□□□□ 0.24
CHD6Q8TD26 AC011467.2-201ENST00000598425 242 ntBASIC16.56■□□□□ 0.24
CHD6Q8TD26 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHD6Q8TD26 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHD6Q8TD26 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CHD6Q8TD26 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHD6Q8TD26 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.55■□□□□ 0.24
CHD6Q8TD26 FAM58CP-201ENST00000435741 640 ntBASIC16.55■□□□□ 0.24
CHD6Q8TD26 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.55■□□□□ 0.24
CHD6Q8TD26 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.55■□□□□ 0.24
CHD6Q8TD26 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHD6Q8TD26 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.55■□□□□ 0.24
CHD6Q8TD26 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CHD6Q8TD26 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHD6Q8TD26 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.55■□□□□ 0.24
CHD6Q8TD26 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHD6Q8TD26 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHD6Q8TD26 AL109659.2-201ENST00000606809 1674 ntBASIC16.55■□□□□ 0.24
CHD6Q8TD26 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHD6Q8TD26 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHD6Q8TD26 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHD6Q8TD26 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CHD6Q8TD26 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHD6Q8TD26 AC113404.2-201ENST00000507884 177 ntBASIC16.55■□□□□ 0.24
CHD6Q8TD26 AL512356.2-201ENST00000546955 174 ntBASIC16.55■□□□□ 0.24
CHD6Q8TD26 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.55■□□□□ 0.24
CHD6Q8TD26 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.55■□□□□ 0.24
CHD6Q8TD26 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
CHD6Q8TD26 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHD6Q8TD26 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.55■□□□□ 0.24
CHD6Q8TD26 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 AC091812.2-201ENST00000619081 385 ntBASIC16.54■□□□□ 0.24
CHD6Q8TD26 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHD6Q8TD26 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 AL121761.2-201ENST00000598007 1648 ntBASIC16.54■□□□□ 0.24
CHD6Q8TD26 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHD6Q8TD26 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHD6Q8TD26 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHD6Q8TD26 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHD6Q8TD26 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHD6Q8TD26 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHD6Q8TD26 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHD6Q8TD26 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHD6Q8TD26 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.54■□□□□ 0.24
CHD6Q8TD26 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHD6Q8TD26 AC073592.4-201ENST00000623827 446 ntBASIC16.54■□□□□ 0.24
CHD6Q8TD26 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD6Q8TD26 PIN1P1-201ENST00000412108 996 ntBASIC16.53■□□□□ 0.24
CHD6Q8TD26 AL627223.1-201ENST00000416693 442 ntBASIC16.53■□□□□ 0.24
CHD6Q8TD26 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.53■□□□□ 0.24
CHD6Q8TD26 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.53■□□□□ 0.24
CHD6Q8TD26 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CHD6Q8TD26 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.53■□□□□ 0.24
CHD6Q8TD26 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD6Q8TD26 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.53■□□□□ 0.24
CHD6Q8TD26 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.53■□□□□ 0.24
CHD6Q8TD26 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.53■□□□□ 0.24
CHD6Q8TD26 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD6Q8TD26 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.53■□□□□ 0.24
CHD6Q8TD26 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.53■□□□□ 0.24
CHD6Q8TD26 PGM5P2-202ENST00000637225 1043 ntBASIC16.53■□□□□ 0.24
CHD6Q8TD26 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD6Q8TD26 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD6Q8TD26 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.53■□□□□ 0.24
CHD6Q8TD26 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
CHD6Q8TD26 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CHD6Q8TD26 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms