Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
CNIH3Q8TBE1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CNIH3Q8TBE1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CNIH3Q8TBE1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 BX276092.2-201ENST00000417668 665 ntBASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.89■□□□□ 0.29
CNIH3Q8TBE1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 PKD1P1-201ENST00000458669 6805 ntBASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 KRT8P32-201ENST00000512863 1461 ntBASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 AL162430.1-201ENST00000480705 870 ntBASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 MIR5787-201ENST00000611784 55 ntBASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 NKILA-202ENST00000614771 2598 ntBASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 AC011676.5-201ENST00000624864 2660 ntBASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CNIH3Q8TBE1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNIH3Q8TBE1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.87■□□□□ 0.29
CNIH3Q8TBE1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms