Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 AC009113.1-201ENST00000570267 2443 ntBASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 AC020763.4-201ENST00000623414 4170 ntBASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CLDND2Q8NHS1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 AL023284.2-201ENST00000405850 579 ntBASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDND2Q8NHS1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDND2Q8NHS1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDND2Q8NHS1 AC135050.7-201ENST00000624508 2218 ntBASIC15.71■□□□□ 0.1
CLDND2Q8NHS1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CLDND2Q8NHS1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CLDND2Q8NHS1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDND2Q8NHS1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
CLDND2Q8NHS1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 SPDYE15P-201ENST00000424157 909 ntBASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 AC036111.1-201ENST00000533973 1582 ntBASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDND2Q8NHS1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 AC005332.1-201ENST00000577698 1310 ntBASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 AP000997.3-201ENST00000623333 2250 ntBASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 MCCD1P1-208ENST00000445732 328 ntBASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 VENTXP5-201ENST00000523979 775 ntBASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDND2Q8NHS1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.68■□□□□ 0.1
CLDND2Q8NHS1 KRT8P3-201ENST00000519669 1449 ntBASIC15.68■□□□□ 0.1
CLDND2Q8NHS1 LINC01311-201ENST00000565162 1445 ntBASIC15.68■□□□□ 0.1
CLDND2Q8NHS1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDND2Q8NHS1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDND2Q8NHS1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLDND2Q8NHS1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDND2Q8NHS1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDND2Q8NHS1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDND2Q8NHS1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms