Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KLHDC9Q8NEP7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.35■□□□□ 0.85
KLHDC9Q8NEP7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.35■□□□□ 0.85
KLHDC9Q8NEP7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.35■□□□□ 0.85
KLHDC9Q8NEP7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.35■□□□□ 0.85
KLHDC9Q8NEP7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KLHDC9Q8NEP7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
KLHDC9Q8NEP7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KLHDC9Q8NEP7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KLHDC9Q8NEP7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KLHDC9Q8NEP7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KLHDC9Q8NEP7 ZNF259P1-201ENST00000407656 1365 ntBASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 AC092183.1-201ENST00000469884 875 ntBASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 AC009533.2-201ENST00000543664 586 ntBASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KLHDC9Q8NEP7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
KLHDC9Q8NEP7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
KLHDC9Q8NEP7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.33■□□□□ 0.85
KLHDC9Q8NEP7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KLHDC9Q8NEP7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.33■□□□□ 0.85
KLHDC9Q8NEP7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
KLHDC9Q8NEP7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
KLHDC9Q8NEP7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.33■□□□□ 0.85
KLHDC9Q8NEP7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.33■□□□□ 0.85
KLHDC9Q8NEP7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.33■□□□□ 0.85
KLHDC9Q8NEP7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.33■□□□□ 0.85
KLHDC9Q8NEP7 AL138831.2-201ENST00000606564 490 ntBASIC20.33■□□□□ 0.85
KLHDC9Q8NEP7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KLHDC9Q8NEP7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KLHDC9Q8NEP7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KLHDC9Q8NEP7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.33■□□□□ 0.84
KLHDC9Q8NEP7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KLHDC9Q8NEP7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KLHDC9Q8NEP7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 PCDHAC2-203ENST00000615316 3011 ntBASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 AC009102.3-201ENST00000623118 1491 ntBASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 BX842568.4-201ENST00000421222 227 ntBASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KLHDC9Q8NEP7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KLHDC9Q8NEP7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KLHDC9Q8NEP7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KLHDC9Q8NEP7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KLHDC9Q8NEP7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
KLHDC9Q8NEP7 RPS2P28-201ENST00000314255 741 ntBASIC20.31■□□□□ 0.84
KLHDC9Q8NEP7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KLHDC9Q8NEP7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KLHDC9Q8NEP7 MIR940-201ENST00000401276 94 ntBASIC20.31■□□□□ 0.84
KLHDC9Q8NEP7 PGAM5P1-201ENST00000518923 814 ntBASIC20.31■□□□□ 0.84
KLHDC9Q8NEP7 IGHV3-22-201ENST00000520721 359 ntBASIC20.31■□□□□ 0.84
KLHDC9Q8NEP7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.31■□□□□ 0.84
KLHDC9Q8NEP7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.31■□□□□ 0.84
KLHDC9Q8NEP7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms