Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AL357033.4-201ENST00000617703 1807 ntBASIC15.33■□□□□ 0.05
ZNF439Q8NDP4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF439Q8NDP4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF439Q8NDP4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF439Q8NDP4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF439Q8NDP4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF439Q8NDP4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF439Q8NDP4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.33■□□□□ 0.05
ZNF439Q8NDP4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 AL109659.2-201ENST00000606809 1674 ntBASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 CA15P1-201ENST00000481698 905 ntBASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
ZNF439Q8NDP4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 AC073592.3-201ENST00000625118 1834 ntBASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 CRYGFP-201ENST00000418459 633 ntBASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 TSPY7P-201ENST00000431358 1114 ntBASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 RBM17P1-201ENST00000453646 1190 ntBASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 AC104581.1-202ENST00000635932 2618 ntBASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
ZNF439Q8NDP4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 AL499627.1-201ENST00000569373 2188 ntBASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 AL023284.2-201ENST00000405850 579 ntBASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 MIR4785-201ENST00000585005 73 ntBASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF439Q8NDP4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms