Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
DNAAF3Q8N9W5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DNAAF3Q8N9W5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
DNAAF3Q8N9W5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 AP005242.2-201ENST00000580065 1175 ntBASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DNAAF3Q8N9W5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 AL354751.1-201ENST00000412768 1863 ntBASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 MYLKP1-201ENST00000509077 1580 ntBASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 MIR564-202ENST00000385049 94 ntBASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 RBM17P1-201ENST00000453646 1190 ntBASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
DNAAF3Q8N9W5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms