Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 TP73-AS1-210ENST00000637775 1455 ntBASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL27A1Q8IZC6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 RCN1P2-201ENST00000398357 915 ntBASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 RPL13AP23-201ENST00000480739 586 ntBASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 AP005117.1-201ENST00000584346 1413 ntBASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 AC092865.5-201ENST00000545435 363 ntBASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL27A1Q8IZC6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 AC021087.4-201ENST00000563761 564 ntBASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 AC009102.3-201ENST00000623118 1491 ntBASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.34■□□□□ 0.37
COL27A1Q8IZC6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
COL27A1Q8IZC6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL27A1Q8IZC6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.33■□□□□ 0.37
COL27A1Q8IZC6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL27A1Q8IZC6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
COL27A1Q8IZC6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
COL27A1Q8IZC6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.33■□□□□ 0.37
COL27A1Q8IZC6 AC140113.2-201ENST00000604370 208 ntBASIC17.33■□□□□ 0.37
COL27A1Q8IZC6 AC099343.3-201ENST00000605834 2503 ntBASIC17.33■□□□□ 0.37
COL27A1Q8IZC6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.33■□□□□ 0.37
COL27A1Q8IZC6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
COL27A1Q8IZC6 AC093484.2-201ENST00000580996 2166 ntBASIC17.33■□□□□ 0.37
COL27A1Q8IZC6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
COL27A1Q8IZC6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
COL27A1Q8IZC6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL27A1Q8IZC6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL27A1Q8IZC6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.33■□□□□ 0.36
COL27A1Q8IZC6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL27A1Q8IZC6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL27A1Q8IZC6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
COL27A1Q8IZC6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms