Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC099343.3-201ENST00000605834 2503 ntBASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00346Q8IVM7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 AC005332.8-201ENST00000622750 2735 ntBASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 AP003071.4-201ENST00000562276 1284 ntBASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00346Q8IVM7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 TSPY7P-201ENST00000431358 1114 ntBASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 AC008550.1-201ENST00000511500 884 ntBASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00346Q8IVM7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 AC135776.1-201ENST00000319817 2481 ntBASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 MYLKP1-201ENST00000509077 1580 ntBASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00346Q8IVM7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms