Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 AL023875.1-201ENST00000640777 796 ntBASIC20.1■□□□□ 0.81
CNGA4Q8IV77 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNGA4Q8IV77 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNGA4Q8IV77 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 AP000593.1-201ENST00000393668 712 ntBASIC20.08■□□□□ 0.81
CNGA4Q8IV77 AC004951.3-201ENST00000418645 1148 ntBASIC20.08■□□□□ 0.81
CNGA4Q8IV77 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNGA4Q8IV77 AC233263.1-201ENST00000578059 224 ntBASIC20.08■□□□□ 0.81
CNGA4Q8IV77 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNGA4Q8IV77 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNGA4Q8IV77 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNGA4Q8IV77 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNGA4Q8IV77 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.08■□□□□ 0.8
CNGA4Q8IV77 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CNGA4Q8IV77 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNGA4Q8IV77 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CNGA4Q8IV77 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CNGA4Q8IV77 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNGA4Q8IV77 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNGA4Q8IV77 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNGA4Q8IV77 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CNGA4Q8IV77 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CNGA4Q8IV77 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNGA4Q8IV77 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms