Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSL3PQ5NE16 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.21■□□□□ 0.51
CTSL3PQ5NE16 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSL3PQ5NE16 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CTSL3PQ5NE16 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CTSL3PQ5NE16 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 AC009102.3-201ENST00000623118 1491 ntBASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 MIR149-201ENST00000384879 89 ntBASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 AC024243.1-201ENST00000609234 778 ntBASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.2■□□□□ 0.5
CTSL3PQ5NE16 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 AC010203.1-204ENST00000548782 407 ntBASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 AL512604.3-201ENST00000569583 964 ntBASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 AC010240.3-201ENST00000607688 395 ntBASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 AL138966.2-201ENST00000621997 464 ntBASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 AC097493.4-201ENST00000641197 219 ntBASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSL3PQ5NE16 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSL3PQ5NE16 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSL3PQ5NE16 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSL3PQ5NE16 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSL3PQ5NE16 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.18■□□□□ 0.5
CTSL3PQ5NE16 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSL3PQ5NE16 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.18■□□□□ 0.5
CTSL3PQ5NE16 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSL3PQ5NE16 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSL3PQ5NE16 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTSL3PQ5NE16 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTSL3PQ5NE16 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTSL3PQ5NE16 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms