Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC124864.1-201ENST00000623408 392 ntBASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 LINC00167-201ENST00000530583 1419 ntBASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
RNFT1Q5M7Z0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 EMBP1-201ENST00000458200 901 ntBASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 AC091607.1-201ENST00000490318 1060 ntBASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 AC074051.2-201ENST00000565115 352 ntBASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 KRT89P-201ENST00000620027 1478 ntBASIC16.61■□□□□ 0.25
RNFT1Q5M7Z0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 AC104819.1-201ENST00000504587 486 ntBASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 AP005901.3-202ENST00000581653 237 ntBASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RNFT1Q5M7Z0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 AC004870.1-201ENST00000315132 882 ntBASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 KRT18P31-201ENST00000506277 1292 ntBASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 AC091304.2-201ENST00000564639 760 ntBASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 AC138894.3-201ENST00000603787 634 ntBASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 AC004263.2-201ENST00000617183 678 ntBASIC16.59■□□□□ 0.25
RNFT1Q5M7Z0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms