Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HTRA3P83110 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HTRA3P83110 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HTRA3P83110 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
HTRA3P83110 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTRA3P83110 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HTRA3P83110 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
HTRA3P83110 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HTRA3P83110 AC034236.2-201ENST00000606662 1610 ntBASIC21.37■■□□□ 1.01
HTRA3P83110 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.37■■□□□ 1.01
HTRA3P83110 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTRA3P83110 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HTRA3P83110 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTRA3P83110 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTRA3P83110 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTRA3P83110 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
HTRA3P83110 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
HTRA3P83110 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTRA3P83110 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HTRA3P83110 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.37■■□□□ 1.01
HTRA3P83110 AC004461.1-201ENST00000412461 403 ntBASIC21.37■■□□□ 1.01
HTRA3P83110 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC21.37■■□□□ 1.01
HTRA3P83110 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HTRA3P83110 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.37■■□□□ 1.01
HTRA3P83110 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HTRA3P83110 MIR6799-201ENST00000620297 69 ntBASIC21.37■■□□□ 1.01
HTRA3P83110 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.37■■□□□ 1.01
HTRA3P83110 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTRA3P83110 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
HTRA3P83110 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.37■■□□□ 1.01
HTRA3P83110 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.37■■□□□ 1.01
HTRA3P83110 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HTRA3P83110 AC004817.3-201ENST00000602957 2129 ntBASIC21.37■■□□□ 1.01
HTRA3P83110 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HTRA3P83110 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTRA3P83110 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTRA3P83110 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.36■■□□□ 1.01
HTRA3P83110 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HTRA3P83110 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.36■■□□□ 1.01
HTRA3P83110 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.36■■□□□ 1.01
HTRA3P83110 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.36■■□□□ 1.01
HTRA3P83110 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTRA3P83110 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTRA3P83110 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HTRA3P83110 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HTRA3P83110 AP002414.1-201ENST00000391405 1147 ntBASIC21.36■■□□□ 1.01
HTRA3P83110 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.36■■□□□ 1.01
HTRA3P83110 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HTRA3P83110 LINC00628-201ENST00000628516 1289 ntBASIC21.36■■□□□ 1.01
HTRA3P83110 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
HTRA3P83110 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HTRA3P83110 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HTRA3P83110 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.36■■□□□ 1.01
HTRA3P83110 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.36■■□□□ 1.01
HTRA3P83110 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.35■■□□□ 1.01
HTRA3P83110 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.35■■□□□ 1.01
HTRA3P83110 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
HTRA3P83110 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.35■■□□□ 1.01
HTRA3P83110 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTRA3P83110 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HTRA3P83110 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HTRA3P83110 AL691432.2-201ENST00000607222 2038 ntBASIC21.35■■□□□ 1.01
HTRA3P83110 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HTRA3P83110 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTRA3P83110 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.35■■□□□ 1.01
HTRA3P83110 FAM58CP-201ENST00000435741 640 ntBASIC21.35■■□□□ 1.01
HTRA3P83110 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.35■■□□□ 1.01
HTRA3P83110 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.35■■□□□ 1.01
HTRA3P83110 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.35■■□□□ 1.01
HTRA3P83110 AC136632.2-201ENST00000512891 861 ntBASIC21.35■■□□□ 1.01
HTRA3P83110 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.35■■□□□ 1.01
HTRA3P83110 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.35■■□□□ 1.01
HTRA3P83110 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.35■■□□□ 1.01
HTRA3P83110 MIR4751-201ENST00000578027 74 ntBASIC21.35■■□□□ 1.01
HTRA3P83110 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.35■■□□□ 1.01
HTRA3P83110 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.35■■□□□ 1.01
HTRA3P83110 PGM5P2-202ENST00000637225 1043 ntBASIC21.35■■□□□ 1.01
HTRA3P83110 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTRA3P83110 AC125634.1-201ENST00000438758 1403 ntBASIC21.35■■□□□ 1.01
HTRA3P83110 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HTRA3P83110 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTRA3P83110 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HTRA3P83110 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTRA3P83110 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.34■■□□□ 1.01
HTRA3P83110 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
HTRA3P83110 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.34■■□□□ 1.01
HTRA3P83110 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.34■■□□□ 1.01
HTRA3P83110 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.34■■□□□ 1.01
HTRA3P83110 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 HCG4B-203ENST00000450128 991 ntBASIC21.34■■□□□ 1.01
HTRA3P83110 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms