Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX4P78413 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX4P78413 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.22■□□□□ 0.67
IRX4P78413 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.22■□□□□ 0.67
IRX4P78413 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.22■□□□□ 0.67
IRX4P78413 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.22■□□□□ 0.67
IRX4P78413 AC140113.3-201ENST00000605663 199 ntBASIC19.22■□□□□ 0.67
IRX4P78413 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
IRX4P78413 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
IRX4P78413 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX4P78413 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX4P78413 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX4P78413 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX4P78413 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.22■□□□□ 0.67
IRX4P78413 AC009113.1-201ENST00000570267 2443 ntBASIC19.22■□□□□ 0.67
IRX4P78413 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX4P78413 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
IRX4P78413 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX4P78413 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX4P78413 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX4P78413 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.22■□□□□ 0.67
IRX4P78413 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.22■□□□□ 0.67
IRX4P78413 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.21■□□□□ 0.67
IRX4P78413 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX4P78413 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX4P78413 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX4P78413 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.21■□□□□ 0.67
IRX4P78413 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IRX4P78413 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX4P78413 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
IRX4P78413 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX4P78413 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX4P78413 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IRX4P78413 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX4P78413 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.21■□□□□ 0.67
IRX4P78413 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.21■□□□□ 0.67
IRX4P78413 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.21■□□□□ 0.67
IRX4P78413 ZNF815P-204ENST00000434898 1737 ntBASIC19.21■□□□□ 0.67
IRX4P78413 HCG4P8-203ENST00000443049 980 ntBASIC19.21■□□□□ 0.67
IRX4P78413 TSPY17P-201ENST00000450329 467 ntBASIC19.21■□□□□ 0.67
IRX4P78413 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX4P78413 AL671277.2-201ENST00000458060 996 ntBASIC19.21■□□□□ 0.67
IRX4P78413 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.21■□□□□ 0.67
IRX4P78413 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.21■□□□□ 0.67
IRX4P78413 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IRX4P78413 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.21■□□□□ 0.67
IRX4P78413 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.21■□□□□ 0.67
IRX4P78413 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.21■□□□□ 0.67
IRX4P78413 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.21■□□□□ 0.67
IRX4P78413 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
IRX4P78413 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.21■□□□□ 0.67
IRX4P78413 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX4P78413 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
IRX4P78413 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
IRX4P78413 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
IRX4P78413 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.21■□□□□ 0.67
IRX4P78413 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.21■□□□□ 0.67
IRX4P78413 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.21■□□□□ 0.67
IRX4P78413 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.21■□□□□ 0.67
IRX4P78413 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IRX4P78413 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
IRX4P78413 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
IRX4P78413 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.2■□□□□ 0.66
IRX4P78413 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.2■□□□□ 0.66
IRX4P78413 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
IRX4P78413 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.2■□□□□ 0.66
IRX4P78413 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
IRX4P78413 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 AL353719.1-201ENST00000566847 864 ntBASIC19.2■□□□□ 0.66
IRX4P78413 AC116407.4-201ENST00000623319 1061 ntBASIC19.2■□□□□ 0.66
IRX4P78413 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.2■□□□□ 0.66
IRX4P78413 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.2■□□□□ 0.66
IRX4P78413 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 AC005332.1-201ENST00000577698 1310 ntBASIC19.2■□□□□ 0.66
IRX4P78413 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX4P78413 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
IRX4P78413 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IRX4P78413 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX4P78413 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX4P78413 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
IRX4P78413 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX4P78413 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IRX4P78413 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX4P78413 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX4P78413 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX4P78413 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
IRX4P78413 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.19■□□□□ 0.66
IRX4P78413 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms