Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CNTNAP1P78357 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.97■■□□□ 1.11
CNTNAP1P78357 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP1P78357 AL158211.5-201ENST00000623583 2518 ntBASIC21.97■■□□□ 1.11
CNTNAP1P78357 Z98044.1-201ENST00000632503 1764 ntBASIC21.97■■□□□ 1.11
CNTNAP1P78357 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CNTNAP1P78357 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.97■■□□□ 1.11
CNTNAP1P78357 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.97■■□□□ 1.11
CNTNAP1P78357 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP1P78357 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP1P78357 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP1P78357 KRT8P50-201ENST00000562022 1438 ntBASIC21.97■■□□□ 1.11
CNTNAP1P78357 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP1P78357 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP1P78357 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.97■■□□□ 1.11
CNTNAP1P78357 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNTNAP1P78357 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.97■■□□□ 1.11
CNTNAP1P78357 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.97■■□□□ 1.11
CNTNAP1P78357 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.97■■□□□ 1.11
CNTNAP1P78357 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP1P78357 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.96■■□□□ 1.11
CNTNAP1P78357 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP1P78357 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP1P78357 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CNTNAP1P78357 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP1P78357 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP1P78357 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP1P78357 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.96■■□□□ 1.11
CNTNAP1P78357 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP1P78357 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.96■■□□□ 1.11
CNTNAP1P78357 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP1P78357 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.96■■□□□ 1.11
CNTNAP1P78357 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.96■■□□□ 1.11
CNTNAP1P78357 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.96■■□□□ 1.11
CNTNAP1P78357 FGFR3P6-201ENST00000457012 610 ntBASIC21.96■■□□□ 1.11
CNTNAP1P78357 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP1P78357 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.96■■□□□ 1.11
CNTNAP1P78357 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP1P78357 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP1P78357 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP1P78357 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CNTNAP1P78357 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.96■■□□□ 1.11
CNTNAP1P78357 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNTNAP1P78357 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CNTNAP1P78357 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.95■■□□□ 1.11
CNTNAP1P78357 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.95■■□□□ 1.11
CNTNAP1P78357 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP1P78357 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP1P78357 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP1P78357 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP1P78357 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.95■■□□□ 1.1
CNTNAP1P78357 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP1P78357 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CNTNAP1P78357 AC004832.2-201ENST00000426397 482 ntBASIC21.95■■□□□ 1.1
CNTNAP1P78357 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
CNTNAP1P78357 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP1P78357 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.95■■□□□ 1.1
CNTNAP1P78357 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.95■■□□□ 1.1
CNTNAP1P78357 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNTNAP1P78357 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CNTNAP1P78357 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.94■■□□□ 1.1
CNTNAP1P78357 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.94■■□□□ 1.1
CNTNAP1P78357 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP1P78357 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.94■■□□□ 1.1
CNTNAP1P78357 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP1P78357 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP1P78357 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP1P78357 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CNTNAP1P78357 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP1P78357 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP1P78357 HLA-J-202ENST00000469281 1241 ntBASIC21.94■■□□□ 1.1
CNTNAP1P78357 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CNTNAP1P78357 KRT89P-201ENST00000620027 1478 ntBASIC21.94■■□□□ 1.1
CNTNAP1P78357 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.94■■□□□ 1.1
CNTNAP1P78357 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.94■■□□□ 1.1
CNTNAP1P78357 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CNTNAP1P78357 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP1P78357 AL353692.3-201ENST00000407031 1396 ntBASIC21.93■■□□□ 1.1
CNTNAP1P78357 MTMR9LP-203ENST00000426597 1545 ntBASIC21.93■■□□□ 1.1
CNTNAP1P78357 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP1P78357 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CNTNAP1P78357 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP1P78357 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP1P78357 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.93■■□□□ 1.1
CNTNAP1P78357 AC132008.2-207ENST00000454517 770 ntBASIC21.93■■□□□ 1.1
CNTNAP1P78357 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.93■■□□□ 1.1
CNTNAP1P78357 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP1P78357 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.93■■□□□ 1.1
CNTNAP1P78357 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.93■■□□□ 1.1
CNTNAP1P78357 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CNTNAP1P78357 AC114341.1-201ENST00000618070 349 ntBASIC21.93■■□□□ 1.1
CNTNAP1P78357 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP1P78357 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.93■■□□□ 1.1
CNTNAP1P78357 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP1P78357 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP1P78357 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CNTNAP1P78357 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNTNAP1P78357 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNTNAP1P78357 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNTNAP1P78357 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms