Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 IGHGP-201ENST00000390555 1178 ntBASIC18.22■□□□□ 0.51
CLDN2P57739 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN2P57739 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN2P57739 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN2P57739 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.22■□□□□ 0.51
CLDN2P57739 UNC93B7-201ENST00000509439 705 ntBASIC18.22■□□□□ 0.51
CLDN2P57739 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.22■□□□□ 0.51
CLDN2P57739 AC009065.1-201ENST00000564055 1225 ntBASIC18.22■□□□□ 0.51
CLDN2P57739 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN2P57739 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN2P57739 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN2P57739 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CLDN2P57739 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN2P57739 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN2P57739 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN2P57739 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN2P57739 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLDN2P57739 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN2P57739 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CLDN2P57739 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN2P57739 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.21■□□□□ 0.51
CLDN2P57739 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.21■□□□□ 0.51
CLDN2P57739 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLDN2P57739 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDN2P57739 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN2P57739 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
CLDN2P57739 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN2P57739 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN2P57739 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CLDN2P57739 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN2P57739 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CLDN2P57739 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CLDN2P57739 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
CLDN2P57739 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN2P57739 KRT18P41-201ENST00000518924 1277 ntBASIC18.2■□□□□ 0.5
CLDN2P57739 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN2P57739 AC090616.6-201ENST00000582640 721 ntBASIC18.2■□□□□ 0.5
CLDN2P57739 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.2■□□□□ 0.5
CLDN2P57739 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.2■□□□□ 0.5
CLDN2P57739 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN2P57739 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN2P57739 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN2P57739 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN2P57739 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN2P57739 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN2P57739 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN2P57739 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN2P57739 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN2P57739 AP000593.1-201ENST00000393668 712 ntBASIC18.19■□□□□ 0.5
CLDN2P57739 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN2P57739 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN2P57739 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN2P57739 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN2P57739 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN2P57739 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLDN2P57739 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN2P57739 RN7SL510P-201ENST00000581311 263 ntBASIC18.19■□□□□ 0.5
CLDN2P57739 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CLDN2P57739 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN2P57739 AL732292.2-201ENST00000609649 430 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms