Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 PRORSD1P-202ENST00000563365 2154 ntBASIC16.09■□□□□ 0.17
CLDN12P56749 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN12P56749 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN12P56749 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CLDN12P56749 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLDN12P56749 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN12P56749 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLDN12P56749 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN12P56749 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN12P56749 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN12P56749 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN12P56749 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.09■□□□□ 0.17
CLDN12P56749 MYC-208ENST00000641036 567 ntBASIC16.09■□□□□ 0.17
CLDN12P56749 MYC-209ENST00000641252 345 ntBASIC16.09■□□□□ 0.17
CLDN12P56749 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CLDN12P56749 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN12P56749 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN12P56749 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN12P56749 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 KRT8P32-201ENST00000512863 1461 ntBASIC16.09■□□□□ 0.17
CLDN12P56749 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.08■□□□□ 0.17
CLDN12P56749 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CLDN12P56749 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN12P56749 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CLDN12P56749 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN12P56749 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CLDN12P56749 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN12P56749 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.08■□□□□ 0.16
CLDN12P56749 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CLDN12P56749 C1QL1P1-201ENST00000568105 661 ntBASIC16.08■□□□□ 0.16
CLDN12P56749 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 AC112777.1-201ENST00000540175 1423 ntBASIC16.08■□□□□ 0.16
CLDN12P56749 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN12P56749 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN12P56749 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN12P56749 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN12P56749 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CLDN12P56749 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLDN12P56749 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN12P56749 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN12P56749 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
CLDN12P56749 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN12P56749 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CLDN12P56749 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN12P56749 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN12P56749 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN12P56749 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN12P56749 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN12P56749 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN12P56749 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN12P56749 SLC29A4P1-201ENST00000398760 971 ntBASIC16.07■□□□□ 0.16
CLDN12P56749 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN12P56749 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN12P56749 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CLDN12P56749 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN12P56749 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN12P56749 MIR5787-201ENST00000611784 55 ntBASIC16.07■□□□□ 0.16
CLDN12P56749 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN12P56749 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CLDN12P56749 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN12P56749 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN12P56749 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN12P56749 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN12P56749 AC008556.1-201ENST00000610908 2040 ntBASIC16.07■□□□□ 0.16
CLDN12P56749 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN12P56749 AC012317.2-201ENST00000623305 2251 ntBASIC16.07■□□□□ 0.16
CLDN12P56749 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN12P56749 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms