Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN6P56747 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLDN6P56747 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLDN6P56747 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN6P56747 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN6P56747 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN6P56747 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN6P56747 AL353692.3-201ENST00000407031 1396 ntBASIC17.72■□□□□ 0.43
CLDN6P56747 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN6P56747 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN6P56747 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CLDN6P56747 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CLDN6P56747 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN6P56747 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN6P56747 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.72■□□□□ 0.43
CLDN6P56747 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN6P56747 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.72■□□□□ 0.43
CLDN6P56747 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN6P56747 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN6P56747 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN6P56747 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLDN6P56747 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN6P56747 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.72■□□□□ 0.43
CLDN6P56747 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN6P56747 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.72■□□□□ 0.43
CLDN6P56747 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLDN6P56747 KRT8P7-201ENST00000533003 1432 ntBASIC17.72■□□□□ 0.43
CLDN6P56747 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CLDN6P56747 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN6P56747 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CLDN6P56747 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN6P56747 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN6P56747 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN6P56747 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN6P56747 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN6P56747 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN6P56747 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN6P56747 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN6P56747 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN6P56747 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN6P56747 AC009065.1-201ENST00000564055 1225 ntBASIC17.71■□□□□ 0.43
CLDN6P56747 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.71■□□□□ 0.43
CLDN6P56747 BNIP3P18-201ENST00000593976 575 ntBASIC17.71■□□□□ 0.43
CLDN6P56747 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN6P56747 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN6P56747 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN6P56747 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN6P56747 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN6P56747 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN6P56747 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLDN6P56747 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.71■□□□□ 0.43
CLDN6P56747 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.71■□□□□ 0.42
CLDN6P56747 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CLDN6P56747 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN6P56747 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN6P56747 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
CLDN6P56747 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN6P56747 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN6P56747 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN6P56747 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN6P56747 AC073648.2-201ENST00000510116 352 ntBASIC17.7■□□□□ 0.42
CLDN6P56747 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.7■□□□□ 0.42
CLDN6P56747 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN6P56747 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN6P56747 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.7■□□□□ 0.42
CLDN6P56747 AC117500.6-201ENST00000624871 588 ntBASIC17.7■□□□□ 0.42
CLDN6P56747 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CLDN6P56747 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN6P56747 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN6P56747 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.7■□□□□ 0.42
CLDN6P56747 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN6P56747 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLDN6P56747 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.7■□□□□ 0.42
CLDN6P56747 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN6P56747 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLDN6P56747 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN6P56747 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN6P56747 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CLDN6P56747 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.69■□□□□ 0.42
CLDN6P56747 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN6P56747 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLDN6P56747 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.69■□□□□ 0.42
CLDN6P56747 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN6P56747 MIR1233-2-201ENST00000408138 82 ntBASIC17.69■□□□□ 0.42
CLDN6P56747 MIR1233-1-201ENST00000408722 82 ntBASIC17.69■□□□□ 0.42
CLDN6P56747 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN6P56747 VENTXP7-201ENST00000475503 772 ntBASIC17.69■□□□□ 0.42
CLDN6P56747 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN6P56747 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN6P56747 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN6P56747 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN6P56747 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN6P56747 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN6P56747 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN6P56747 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN6P56747 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN6P56747 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN6P56747 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN6P56747 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN6P56747 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms