Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.34■□□□□ 0.85
PEX3P56589 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.34■□□□□ 0.85
PEX3P56589 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.33■□□□□ 0.85
PEX3P56589 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PEX3P56589 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PEX3P56589 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEX3P56589 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEX3P56589 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PEX3P56589 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
PEX3P56589 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
PEX3P56589 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEX3P56589 AL031133.1-201ENST00000406807 723 ntBASIC20.33■□□□□ 0.85
PEX3P56589 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.33■□□□□ 0.85
PEX3P56589 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PEX3P56589 AC009065.1-201ENST00000564055 1225 ntBASIC20.33■□□□□ 0.85
PEX3P56589 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.33■□□□□ 0.85
PEX3P56589 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.33■□□□□ 0.85
PEX3P56589 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PEX3P56589 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PEX3P56589 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.33■□□□□ 0.84
PEX3P56589 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PEX3P56589 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PEX3P56589 LINC01311-201ENST00000565162 1445 ntBASIC20.33■□□□□ 0.84
PEX3P56589 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.33■□□□□ 0.84
PEX3P56589 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PEX3P56589 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.33■□□□□ 0.84
PEX3P56589 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PEX3P56589 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PEX3P56589 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PEX3P56589 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.32■□□□□ 0.84
PEX3P56589 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
PEX3P56589 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
PEX3P56589 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX3P56589 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.32■□□□□ 0.84
PEX3P56589 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.32■□□□□ 0.84
PEX3P56589 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX3P56589 MIR149-201ENST00000384879 89 ntBASIC20.32■□□□□ 0.84
PEX3P56589 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.32■□□□□ 0.84
PEX3P56589 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
PEX3P56589 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.32■□□□□ 0.84
PEX3P56589 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PEX3P56589 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PEX3P56589 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX3P56589 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX3P56589 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PEX3P56589 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX3P56589 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PEX3P56589 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.32■□□□□ 0.84
PEX3P56589 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PEX3P56589 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
PEX3P56589 AL391807.1-203ENST00000604392 2365 ntBASIC20.31■□□□□ 0.84
PEX3P56589 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.31■□□□□ 0.84
PEX3P56589 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.31■□□□□ 0.84
PEX3P56589 AC009102.3-201ENST00000623118 1491 ntBASIC20.31■□□□□ 0.84
PEX3P56589 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.31■□□□□ 0.84
PEX3P56589 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEX3P56589 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.31■□□□□ 0.84
PEX3P56589 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
PEX3P56589 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PEX3P56589 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEX3P56589 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.31■□□□□ 0.84
PEX3P56589 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PEX3P56589 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEX3P56589 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEX3P56589 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEX3P56589 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEX3P56589 HBZP1-201ENST00000354915 429 ntBASIC20.31■□□□□ 0.84
PEX3P56589 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.31■□□□□ 0.84
PEX3P56589 AL136038.4-201ENST00000603606 1261 ntBASIC20.31■□□□□ 0.84
PEX3P56589 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
PEX3P56589 AC083849.1-201ENST00000615227 514 ntBASIC20.31■□□□□ 0.84
PEX3P56589 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.31■□□□□ 0.84
PEX3P56589 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PEX3P56589 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEX3P56589 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PEX3P56589 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.31■□□□□ 0.84
PEX3P56589 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PEX3P56589 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
PEX3P56589 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PEX3P56589 SDHAP2-201ENST00000455183 2001 ntBASIC20.31■□□□□ 0.84
PEX3P56589 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PEX3P56589 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEX3P56589 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PEX3P56589 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEX3P56589 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.3■□□□□ 0.84
PEX3P56589 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PEX3P56589 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PEX3P56589 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEX3P56589 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PEX3P56589 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEX3P56589 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEX3P56589 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEX3P56589 PVRIG2P-201ENST00000435460 978 ntBASIC20.3■□□□□ 0.84
PEX3P56589 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.3■□□□□ 0.84
PEX3P56589 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PEX3P56589 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.3■□□□□ 0.84
PEX3P56589 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.3■□□□□ 0.84
PEX3P56589 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.3■□□□□ 0.84
PEX3P56589 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.3■□□□□ 0.84
PEX3P56589 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 396.1 ms