Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NUBP1P53384 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.38■□□□□ 0.53
NUBP1P53384 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NUBP1P53384 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.37■□□□□ 0.53
NUBP1P53384 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NUBP1P53384 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUBP1P53384 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUBP1P53384 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUBP1P53384 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NUBP1P53384 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC18.37■□□□□ 0.53
NUBP1P53384 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.37■□□□□ 0.53
NUBP1P53384 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC18.37■□□□□ 0.53
NUBP1P53384 MKNK2P1-201ENST00000437526 628 ntBASIC18.37■□□□□ 0.53
NUBP1P53384 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC18.37■□□□□ 0.53
NUBP1P53384 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.37■□□□□ 0.53
NUBP1P53384 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.37■□□□□ 0.53
NUBP1P53384 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC18.37■□□□□ 0.53
NUBP1P53384 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NUBP1P53384 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.37■□□□□ 0.53
NUBP1P53384 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUBP1P53384 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUBP1P53384 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
NUBP1P53384 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NUBP1P53384 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NUBP1P53384 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NUBP1P53384 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.37■□□□□ 0.53
NUBP1P53384 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.37■□□□□ 0.53
NUBP1P53384 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NUBP1P53384 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUBP1P53384 AC006333.2-201ENST00000607957 2099 ntBASIC18.37■□□□□ 0.53
NUBP1P53384 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NUBP1P53384 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NUBP1P53384 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.36■□□□□ 0.53
NUBP1P53384 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NUBP1P53384 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NUBP1P53384 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NUBP1P53384 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NUBP1P53384 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.36■□□□□ 0.53
NUBP1P53384 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.36■□□□□ 0.53
NUBP1P53384 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.36■□□□□ 0.53
NUBP1P53384 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.36■□□□□ 0.53
NUBP1P53384 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.36■□□□□ 0.53
NUBP1P53384 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
NUBP1P53384 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.36■□□□□ 0.53
NUBP1P53384 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.36■□□□□ 0.53
NUBP1P53384 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.36■□□□□ 0.53
NUBP1P53384 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NUBP1P53384 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NUBP1P53384 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.36■□□□□ 0.53
NUBP1P53384 AC064836.3-201ENST00000607928 673 ntBASIC18.36■□□□□ 0.53
NUBP1P53384 C20orf181-201ENST00000623918 480 ntBASIC18.36■□□□□ 0.53
NUBP1P53384 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NUBP1P53384 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.35■□□□□ 0.53
NUBP1P53384 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.35■□□□□ 0.53
NUBP1P53384 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.35■□□□□ 0.53
NUBP1P53384 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
NUBP1P53384 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.35■□□□□ 0.53
NUBP1P53384 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.35■□□□□ 0.53
NUBP1P53384 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.35■□□□□ 0.53
NUBP1P53384 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
NUBP1P53384 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUBP1P53384 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.35■□□□□ 0.53
NUBP1P53384 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUBP1P53384 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUBP1P53384 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUBP1P53384 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUBP1P53384 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUBP1P53384 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NUBP1P53384 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.34■□□□□ 0.53
NUBP1P53384 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.34■□□□□ 0.53
NUBP1P53384 AC092474.2-201ENST00000424288 719 ntBASIC18.34■□□□□ 0.53
NUBP1P53384 AC190387.1-201ENST00000551683 408 ntBASIC18.34■□□□□ 0.53
NUBP1P53384 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.34■□□□□ 0.53
NUBP1P53384 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NUBP1P53384 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUBP1P53384 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUBP1P53384 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUBP1P53384 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NUBP1P53384 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUBP1P53384 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NUBP1P53384 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NUBP1P53384 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NUBP1P53384 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms