Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPT1AP50416 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CPT1AP50416 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPT1AP50416 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.45■□□□□ 0.87
CPT1AP50416 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.45■□□□□ 0.86
CPT1AP50416 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPT1AP50416 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPT1AP50416 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.45■□□□□ 0.86
CPT1AP50416 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPT1AP50416 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPT1AP50416 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.45■□□□□ 0.86
CPT1AP50416 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.45■□□□□ 0.86
CPT1AP50416 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.45■□□□□ 0.86
CPT1AP50416 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.45■□□□□ 0.86
CPT1AP50416 BNIP3P18-201ENST00000593976 575 ntBASIC20.45■□□□□ 0.86
CPT1AP50416 AL591684.3-201ENST00000605187 298 ntBASIC20.45■□□□□ 0.86
CPT1AP50416 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.45■□□□□ 0.86
CPT1AP50416 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPT1AP50416 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPT1AP50416 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CPT1AP50416 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CPT1AP50416 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPT1AP50416 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPT1AP50416 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPT1AP50416 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CPT1AP50416 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.44■□□□□ 0.86
CPT1AP50416 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.44■□□□□ 0.86
CPT1AP50416 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CPT1AP50416 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.44■□□□□ 0.86
CPT1AP50416 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.44■□□□□ 0.86
CPT1AP50416 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.44■□□□□ 0.86
CPT1AP50416 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.44■□□□□ 0.86
CPT1AP50416 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPT1AP50416 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CPT1AP50416 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.44■□□□□ 0.86
CPT1AP50416 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPT1AP50416 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPT1AP50416 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.44■□□□□ 0.86
CPT1AP50416 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPT1AP50416 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.44■□□□□ 0.86
CPT1AP50416 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPT1AP50416 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPT1AP50416 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPT1AP50416 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPT1AP50416 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPT1AP50416 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPT1AP50416 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPT1AP50416 TSPY12P-201ENST00000421279 868 ntBASIC20.43■□□□□ 0.86
CPT1AP50416 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPT1AP50416 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.43■□□□□ 0.86
CPT1AP50416 AC096582.2-201ENST00000510860 516 ntBASIC20.43■□□□□ 0.86
CPT1AP50416 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CPT1AP50416 MIR5100-201ENST00000579544 119 ntBASIC20.43■□□□□ 0.86
CPT1AP50416 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CPT1AP50416 BX640515.1-201ENST00000617215 977 ntBASIC20.43■□□□□ 0.86
CPT1AP50416 AC114341.1-201ENST00000618070 349 ntBASIC20.43■□□□□ 0.86
CPT1AP50416 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CPT1AP50416 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.43■□□□□ 0.86
CPT1AP50416 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CPT1AP50416 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPT1AP50416 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPT1AP50416 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPT1AP50416 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPT1AP50416 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPT1AP50416 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPT1AP50416 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPT1AP50416 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPT1AP50416 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CPT1AP50416 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CPT1AP50416 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.42■□□□□ 0.86
CPT1AP50416 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.42■□□□□ 0.86
CPT1AP50416 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.42■□□□□ 0.86
CPT1AP50416 AC120114.3-201ENST00000611923 658 ntBASIC20.42■□□□□ 0.86
CPT1AP50416 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 AC007952.6-201ENST00000573168 2673 ntBASIC20.42■□□□□ 0.86
CPT1AP50416 AC003957.1-201ENST00000625108 2673 ntBASIC20.42■□□□□ 0.86
CPT1AP50416 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.42■□□□□ 0.86
CPT1AP50416 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.42■□□□□ 0.86
CPT1AP50416 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPT1AP50416 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.41■□□□□ 0.86
CPT1AP50416 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPT1AP50416 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms