Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CSNK1EP49674 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.1■□□□□ 0.49
CSNK1EP49674 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CSNK1EP49674 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.1■□□□□ 0.49
CSNK1EP49674 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.1■□□□□ 0.49
CSNK1EP49674 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSNK1EP49674 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CSNK1EP49674 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1EP49674 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.09■□□□□ 0.49
CSNK1EP49674 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CSNK1EP49674 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1EP49674 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1EP49674 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.09■□□□□ 0.49
CSNK1EP49674 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1EP49674 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1EP49674 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1EP49674 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1EP49674 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1EP49674 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1EP49674 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1EP49674 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSNK1EP49674 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CSNK1EP49674 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.09■□□□□ 0.49
CSNK1EP49674 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.09■□□□□ 0.49
CSNK1EP49674 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.09■□□□□ 0.49
CSNK1EP49674 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.09■□□□□ 0.49
CSNK1EP49674 BX640515.1-201ENST00000617215 977 ntBASIC18.09■□□□□ 0.49
CSNK1EP49674 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.09■□□□□ 0.49
CSNK1EP49674 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CSNK1EP49674 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CSNK1EP49674 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CSNK1EP49674 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.09■□□□□ 0.49
CSNK1EP49674 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.09■□□□□ 0.49
CSNK1EP49674 AL163051.1-201ENST00000569214 1512 ntBASIC18.08■□□□□ 0.49
CSNK1EP49674 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CSNK1EP49674 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSNK1EP49674 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.08■□□□□ 0.49
CSNK1EP49674 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CSNK1EP49674 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSNK1EP49674 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CSNK1EP49674 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CSNK1EP49674 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CSNK1EP49674 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1EP49674 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1EP49674 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1EP49674 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.08■□□□□ 0.48
CSNK1EP49674 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1EP49674 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.08■□□□□ 0.48
CSNK1EP49674 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CSNK1EP49674 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.08■□□□□ 0.48
CSNK1EP49674 TP73-AS1-207ENST00000624167 988 ntBASIC18.08■□□□□ 0.48
CSNK1EP49674 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CSNK1EP49674 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1EP49674 AL032819.2-201ENST00000624543 2162 ntBASIC18.08■□□□□ 0.48
CSNK1EP49674 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.08■□□□□ 0.48
CSNK1EP49674 AC099343.3-201ENST00000605834 2503 ntBASIC18.08■□□□□ 0.48
CSNK1EP49674 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1EP49674 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CSNK1EP49674 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.07■□□□□ 0.48
CSNK1EP49674 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1EP49674 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.07■□□□□ 0.48
CSNK1EP49674 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1EP49674 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1EP49674 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1EP49674 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.07■□□□□ 0.48
CSNK1EP49674 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.07■□□□□ 0.48
CSNK1EP49674 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1EP49674 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1EP49674 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CSNK1EP49674 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.07■□□□□ 0.48
CSNK1EP49674 POM121L3P-201ENST00000419331 1163 ntBASIC18.07■□□□□ 0.48
CSNK1EP49674 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.07■□□□□ 0.48
CSNK1EP49674 FAM197Y8-203ENST00000450145 560 ntBASIC18.07■□□□□ 0.48
CSNK1EP49674 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1EP49674 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.07■□□□□ 0.48
CSNK1EP49674 AC064862.7-201ENST00000604520 867 ntBASIC18.07■□□□□ 0.48
CSNK1EP49674 AL591684.3-201ENST00000605187 298 ntBASIC18.07■□□□□ 0.48
CSNK1EP49674 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CSNK1EP49674 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1EP49674 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1EP49674 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CSNK1EP49674 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CSNK1EP49674 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.07■□□□□ 0.48
CSNK1EP49674 MTMR9LP-203ENST00000426597 1545 ntBASIC18.07■□□□□ 0.48
CSNK1EP49674 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CSNK1EP49674 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.07■□□□□ 0.48
CSNK1EP49674 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CSNK1EP49674 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1EP49674 AC007952.6-201ENST00000573168 2673 ntBASIC18.06■□□□□ 0.48
CSNK1EP49674 AC003957.1-201ENST00000625108 2673 ntBASIC18.06■□□□□ 0.48
CSNK1EP49674 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.06■□□□□ 0.48
CSNK1EP49674 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CSNK1EP49674 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CSNK1EP49674 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1EP49674 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1EP49674 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1EP49674 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.06■□□□□ 0.48
CSNK1EP49674 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.06■□□□□ 0.48
CSNK1EP49674 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSNK1EP49674 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms